NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE276376 Query DataSets for GSE276376
Status Public on Sep 25, 2024
Title The pore-forming apolipoprotein APOL7C drives phagosomal rupture and antigen cross-presentation by dendritic cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Conventional dendritic cells (cDCs) generate protective cytotoxic T lymphocyte (CTL) responses against pathogens and tumours. This is achieved through a process known as cross-presentation (XP) and, despite its obvious biological importance, the mechanism(s) driving XP remain unclear. Here, we show that a cDC-specific pore-forming protein called apolipoprotein L 7C (APOL7C) is upregulated in response to innate immune stimuli and is recruited to phagosomes. Strikingly, its association with phagosomes leads to phagosomal rupture. This allows for the escape of engulfed antigens to the cytosol where they can be processed via the endogenous MHC class I antigen processing pathway. Accordingly, mice deficient in APOL7C do not efficiently prime CD8+ T cells in response to immunization with bead-bound and cell-associated antigens. Altogether, our data indicate the presence of dedicated apolipoproteins that mediate the delivery of phagocytosed proteins to the cytosol of activated cDCs to facilitate XP.
 
Overall design To investigate genes upregulated in MuTuDC1940 cells upon stimulation with poly(I:C). MuTuDC1940 cells were treated with or without poly(I:C) at 5 ug/ml (micrograms per millilitre) for 18 hours before RNA extraction and analysis.
 
Contributor(s) Canton J, Huang S, Gonzales G, Wilkinson L
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Sep 04, 2024
Last update date Sep 25, 2024
Contact name Paul Gordon
E-mail(s) gordonp@ucalgary.ca
Phone 4034816284
Organization name University of Calgary
Street address 3330 Hospital Drive NW
City Calgary
State/province AB
ZIP/Postal code T2N4N1
Country Canada
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (6)
GSM8497374 Untreated MuTuDC1940 replicate 1
GSM8497375 Untreated MuTuDC1940 replicate 2
GSM8497376 Untreated MuTuDC1940 replicate 3
Relations
BioProject PRJNA1156795

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE276376_fpkm.txt.gz 1.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap