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Series GSE275672 Query DataSets for GSE275672
Status Public on Aug 31, 2024
Title RNA binding protein Pcbp1 maintains mitochondria integrity to promote antibody production and germinal center response[scRNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary B cells are crucial for adaptive immunity, orchestrating humoral responses by producing antibodies essential for pathogen clearance. Here, we show that Poly(rC) binding protein 1 (Pcbp1), a multifunctional RNA-binding protein, is a key regulator of antibody production in B cells. Pcbp1 deficiency in B cells resulted in significant reductions in IgM expression at steady state and compromised differentiation of germinal center B cells and production of high-affinity antibodies upon immunization. These effects result from compromised mitochondrial integrity in Pcbp1-deficient B cells, including compromised mitochondrial electron transport chain (ETC) complex I and increased mitochondrial ROS production. Blocking mitochondrial ROS production rescued IgM production and improved germinal center responses caused by Pcbp1 deficiency. Mechanistically, Pcbp1 promotes the expression of Fdxr, a critical component of ETC complex I, via binding to its 3’UTR. Overall, our findings reveal a novel role for Pcbp1 in regulating mitochondrial function, protein synthesis, and antibody responses in B cells, providing novel insight into post-transcriptional regulation and mitochondrial functions.
 
Overall design To elucidate the mechanism of Pcbp1 regulation in GCB development, NP+ GCB cells (CD19+ B220+ NP+ GL7+ CD95+) were isolated from wild-type (WT) or Pcbp1 fl/fl AID-Cre mice (Pcbp1 GCB KO) and analyzed using single-cell RNA sequencing (scRNA-seq).
 
Contributor(s) Chang X, Zhu L, Li G, Ling L
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Submission date Aug 26, 2024
Last update date Aug 31, 2024
Contact name Xing Chang
E-mail(s) changxing@westlake.edu.cn
Phone 057187920973
Organization name Westlake University
Department School of Life Sciences
Lab Immune Regulation and Human Diseases
Street address No.18 Shilongshan Road Cloud Town
City Xihu District, Hangzhou
State/province Zhejiang
ZIP/Postal code 310024
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM8482176 GCB, WT, D13
GSM8482177 GCB, KO, D13
Relations
BioProject PRJNA1152555

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Supplementary file Size Download File type/resource
GSE275672_RAW.tar 102.3 Mb (http)(custom) TAR (of MTX, TSV)
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Raw data are available in SRA

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