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Series GSE274489 Query DataSets for GSE274489
Status Public on Aug 28, 2024
Title IL-12/IL-23 blockade reveals patterns of asynchronous inflammation in pyoderma gangrenosum
Organism Homo sapiens
Experiment type Other
Summary Pyoderma Gangrenosum (PG) is a rare and extremely painful neutrophilic dermatosis associated with non-healing cutaneous ulcers affecting 3-10 individuals per million people. The etiology and molecular pathogenetic events of this disease are yet unknown. To investigate how this therapeutic regime shaped the underlying inflammatory response, we performed spatial transcriptomics on lesional biopsies from patients before and after ustekinumab treatment. Our study provides high resolution temporal insights into the inflammatory environment of PG lesional skin following treatment with IL-12/IL-23 blockade in two patients with classic and peristomal PG. This work highlights that while inhibition of representative cytokines of the Th1 and Th17 pathways shows promise as a treatment for PG patients, it does not dampen all active inflammatory pathways.
 
Overall design Two PG patients with a samples/skin biopsy before and after ustekinumab administration. All samples were used for the spatial transcriptomic analysis.
 
Contributor(s) Moreau JM, Ortega-Loayza AG, Yadav R
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Submission date Aug 10, 2024
Last update date Aug 29, 2024
Contact name Joshua M Moreau
E-mail(s) moreauj@ohsu.edu
Organization name Oregon Health & Science University
Department Department of Dermatology
Lab Moreau
Street address 2720 S Moody Ave.
City Portland
State/province OR
ZIP/Postal code 97201
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM8450059 VIL230724JM, DP22, 06924
GSM8450060 VIL230724JM, DP22, 7935
GSM8450061 VIL230724JM, DP23, 1206
Relations
BioProject PRJNA1146733

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Supplementary file Size Download File type/resource
GSE274489_RAW.tar 140.9 Mb (http)(custom) TAR (of CSV, JPG, JSON, MTX, PNG, TSV)
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Raw data are available in SRA

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