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Series GSE272821 Query DataSets for GSE272821
Status Public on Jul 26, 2024
Title Multi-omics datasets for finer-scale dissection of chromatin architecture alterations in radiation induced malignant transformation of bronchial epithelial cells [STAG2 CUT&Tag]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary we generated CUT&Tag, ATAC-seq, RNA-seq, high-resolution Hi-C and Micro-C datasets for finer-scale dissection of chromatin architecture alterations in radiation induced malignant transformation of bronchial epithelial cells.
 
Overall design STAG2 CUT&Tag profiles of normal control human bronchial epithelial cells, TP63 overexpressed human bronchial epithelial cells and radiation induced lung cancer cells
 
Contributor(s) pingkun Z, qiaowei L
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Submission date Jul 22, 2024
Last update date Jul 26, 2024
Contact name Yi Hu
E-mail(s) huyi301zlxb@sina.com
Organization name Chinese PLA General Hospital
Street address No. 28 Fuxing Rd, Haidian district,Beijing
City Beijing
ZIP/Postal code 100853
Country China
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (6)
GSM8413041 BEP2DNC1 [STAG2 CUT&Tag]
GSM8413042 BEP2DNC2 [STAG2 CUT&Tag]
GSM8413043 BEP2DOE1 [STAG2 CUT&Tag]
This SubSeries is part of SuperSeries:
GSE175860 Multi-omics datasets for finer-scale dissection of chromatin architecture alterations in radiation induced malignant transformation of bronchial epithelial cells.
Relations
BioProject PRJNA1138794

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE272821_RAW.tar 1.1 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA

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