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Series GSE272369 Query DataSets for GSE272369
Status Public on Oct 09, 2024
Title Cell-Type-Specific Epigenetic Priming of Gene Expression in Nucleus Accumbens by Cocaine
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary A hallmark of addiction is the ability of drugs of abuse to trigger relapse after periods of prolonged abstinence. Here, we describe a novel epigenetic mechanism whereby chronic cocaine exposure causes lasting chromatin and downstream transcriptional modifications in the nucleus accumbens (NAc), a critical brain region controlling motivation. We link prolonged withdrawal from cocaine to the depletion of the histone variant H2A.Z, coupled with increased genome accessibility and latent priming of gene transcription, in D1 dopamine receptor-expressing medium spiny neurons (D1 MSNs) that relate to aberrant gene expression upon drug relapse. The histone chaperone ANP32E removes H2A.Z from chromatin, and we demonstrate that D1 MSN-selective Anp32e knockdown prevents cocaine-induced H2A.Z depletion and blocks cocaine’s rewarding actions. By contrast, very different effects of cocaine exposure, withdrawal, and relapse were found for D2 MSNs. These findings establish histone variant exchange as an important mechanism and clinical target engaged by drugs of abuse to corrupt brain function and behavior.
 
Overall design we performed ChIP-seq for H2A.Z and, simultaneously, for total histone H3 in 4 conditions - Saline Saline, Saline Cocaine, Cocaine Saline and Cocaine-Cocaine.
 
Contributor(s) Mews P, Van der Zee Y, Gurung A, Nestler EJ
Citation(s) 39365860
Submission date Jul 16, 2024
Last update date Oct 09, 2024
Contact name Aarthi Ramakrishnan
E-mail(s) aarthi.ramakrishnan@mssm.edu
Organization name Icahn School of Medicine at Mount Sinai
Department Neuroscience
Street address 1425 Madison Avenue
City New York
State/province New York
ZIP/Postal code 10029
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (12)
GSM8399576 H2AZ_SC_1
GSM8399578 H2AZ_SS_1
GSM8399580 H2AZ_SS_2
Relations
BioProject PRJNA1136526

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE272369_annotated_H2AZ_CC_challenge_peaks.txt.gz 190.1 Kb (ftp)(http) TXT
GSE272369_annotated_H2AZ_CS_withdrawal_peaks.txt.gz 242.4 Kb (ftp)(http) TXT
GSE272369_annotated_H2AZ_SC_acute_peaks.txt.gz 959.1 Kb (ftp)(http) TXT
GSE272369_annotated_H2AZ_SS_saline_peaks.txt.gz 984.0 Kb (ftp)(http) TXT
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