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Series GSE271698 Query DataSets for GSE271698
Status Public on Jul 13, 2024
Title B cell-intrinsic IFN-g promotes CD11c+ age-associated B cell differentiation and compromises affinity-based germinal center selection in lupus
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Lupus patients respond less efficiently to vaccinations and are more susceptible to infections. Previously, we have shown, in lupus models, that excessive CD11c+ age-associated B cells (ABCs) not only contribute to autoantibody production but also compromise antigen-specific germinal center (GC) B cell selection and affinity maturation by promoting aberrant T cell activation. Yet, how CD11c+ ABC differentiation is regulated is not fully understood. Here we show that B cell-intrinsic IFN-γ is required for excessive CD11c+ ABC differentiation in lupus mice. B cell-intrinsic IFN-γ is mainly produced by CD11c+ ABCs. IFN-γ-deficiency leads to decreased expression of ABC characteristic genes, including Zeb2, an ABC-specific transcription factor recently described. We further show that ablating IFN-γ can normalize T cell overactivation and rescue antigen-specific GC responses in lupus mice. Our study offers insight into the crucial role of B cell-intrinsic IFN-γ in promoting CD11c+ ABC differentiation and compromising affinity-based germinal center selection and affinity maturation in lupus, providing a potential target for lupus treatment.
 
Overall design To understand the impact of B cell-intrinsic IFN-g on CD11c+ ABC differentiation, we sorted CD11c+ ABCs from spleens of ShipDBIfng-/- and ShipDB mice. Following total RNA extraction, we employed SMART-seq for comprehensive transcriptomic profiling.
 
Contributor(s) Liu S, Zhang W, Tian S, Zhang Y, Yin Z, Huang G, Zhang H, Li F
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Submission date Jul 08, 2024
Last update date Jul 13, 2024
Contact name Fubin Li
E-mail(s) fubin.li@sjtu.edu.cn
Phone 18918925314
Organization name Shanghai Jiao Tong University School of Medicine
Street address 280 South Chongqing Road, Shanghai, 200025, China
City Shanghai
State/province Shanghai
ZIP/Postal code 200025
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (1)
GSM8382747 CD11c+ ABCs, mice
Relations
BioProject PRJNA1132944

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Supplementary file Size Download File type/resource
GSE271698_count.csv.gz 384.2 Kb (ftp)(http) CSV
GSE271698_norm.csv.gz 905.3 Kb (ftp)(http) CSV
GSE271698_readme.txt 1.9 Kb (ftp)(http) TXT
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Raw data are available in SRA

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