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Series GSE269509 Query DataSets for GSE269509
Status Public on Jun 14, 2024
Title Regulation of intracellular pH by SLC4A7 tunes mTORC1 function to promote plasma cell differentiation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary B cells differentiate into antibody-producing plasma cells, which are critical for humoral immunity, autoimmunity, and vaccine responses. Despite the importance of environmental stressors on regulating humoral immune responses, the influence of pH on PC differentiation has not been described. Here, we identified SLC4A7, a sodium/bicarbonate cotransporter, as a selective regulator of PC differentiation. SLC4A7 deletion impaired the formation of PCs and humoral immunity to influenza A virus infection in mice. Mechanistically, we find that SLC4A7 prevents acidification of intracellular pH and thus maintains lysosomal function and mTORC1 activity. Loss of SLC4A7 suppresses PC differentiation under conditions of extracellular acidosis in vitro and in a mouse model of metabolic acidosis. Here we reveal a novel relationship between the regulation of intracellular pH by SLC4A7 and mTORC1-dependent PC differentiation and humoral immunity.
 
Overall design To investigate the pathways dysregulated downstream of SLC4A7 deletion, we sorted in vitro-differentiated CD138+ plasma cells (PCs) and CD138- non-PCs from Slc4a7-KO and WT murine B cells. B cells were stimualted with NIH3T3 feeder cells expressing CD40L and BAFF, in the presence of IL-4.
 
Contributor(s) Tao A, Hu K, Feske S
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Submission date Jun 10, 2024
Last update date Jun 14, 2024
Contact name Anthony Tao
E-mail(s) Anthony.Tao@nyumc.org
Organization name New York University Grossman School of Medicine
Department Pathology
Street address 550 1st Ave Smilow 506
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (12)
GSM8317839 Slc4a7-KO non-PC #1
GSM8317840 Slc4a7-KO non-PC #2
GSM8317841 Slc4a7-KO non-PC #3
Relations
BioProject PRJNA1122164

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE269509_raw_counts.txt.gz 735.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA

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