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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 28, 2024 |
| Title |
Transcription factors Sox8 and Sox10 contribute differentially to maintenance of the differentiated state in oligodendrocytes |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
To identify target genes of the transcription factors Sox8 and Sox10 in oligodendrocytes in a genome-wide and unbiased approach, we induced oligodendocyte-specific deletion of Sox8, Sox10 or a combination thereof (Sox8 knockout, Sox10 knockout, double knockout) in 2 months-old mice, dissected the corpus callosum of control and mutant mice after 21 days and isolated total RNA for ensuing RNA-Seq studies. Among others we detected substantial changes in the expression of genes associated with differentiation of oligodendrocytes and myelination in Sox10 knockout mice as well as double knockout mice but not in Sox8 knockout mice.
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| Overall design |
We generated mRNA profiles of control, Sox8 knockout, Sox10 knockout and double knockout mice using the Illumina NovaSeq 6000, PE 2x150 platform.
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| Web link |
https://www.mdpi.com/1422-0067/25/16/8754
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| Contributor(s) |
Joerg LM, Sock E, Wegner M |
| Citation(s) |
2024, 25, 39201442 |
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| Submission date |
Jun 05, 2024 |
| Last update date |
Sep 30, 2024 |
| Contact name |
Michael Wegner |
| Organization name |
Friedrich-Alexander Universität Erlangen-Nürnberg
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| Department |
Institut of Biochemistry
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| Lab |
Michael Wegner
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| Street address |
Fahrstr. 17
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| City |
Erlangen |
| State/province |
Bavaria |
| ZIP/Postal code |
91054 |
| Country |
Germany |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (16)
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| GSM8306664 |
corpus callosum, control, biol rep4 |
| GSM8306665 |
corpus callosum, Sox8 knockout, biol rep1 |
| GSM8306666 |
corpus callosum, Sox8 knockout, biol rep2 |
| GSM8306667 |
corpus callosum, Sox8 knockout, biol rep3 |
| GSM8306668 |
corpus callosum, Sox8 knockout, biol rep4 |
| GSM8306669 |
corpus callosum, Sox10 knockout, biol rep1 |
| GSM8306670 |
corpus callosum, Sox10 knockout, biol rep2 |
| GSM8306671 |
corpus callosum, Sox10 knockout, biol rep3 |
| GSM8306672 |
corpus callosum, Sox10 knockout, biol rep4 |
| GSM8306673 |
corpus callosum, double knockout, biol rep1 |
| GSM8306674 |
corpus callosum, double knockout, biol rep2 |
| GSM8306675 |
corpus callosum, double knockout, biol rep3 |
| GSM8306676 |
corpus callosum, double knockout, biol rep4 |
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| Relations |
| BioProject |
PRJNA1120355 |
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