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Series GSE267338 Query DataSets for GSE267338
Status Public on May 31, 2024
Title N-acetylglucosamine (GlcNAc) sensor Ngs1 is essential for GlcNAc-involved biological control potential of fungal insecticide Beauveria bassiana
Organism Beauveria bassiana
Experiment type Expression profiling by high throughput sequencing
Summary Beauveria bassiana is a popular and eco-friendly biopesticide. Sensing N-acetylglucosamine (GlcNAc) , a building block of both insect exoskeleton and fungal cell wall, might play a vital role during B. bassiana pathogen-pest interaction. Previous studies in Candida albicans have demonstrated that a GlcNAc sensor (termed as Ngs1) was in response to GlcNAc signal sensing and transportation. Herein, we found a Ngs1 homology in B. bassiana, and reported the alteration of transcriptomic profiles between wild-type strain and Ngs1-deletion mutants grown on cuticle broth (CB) supplemented with 1% cuticle powder of Locusta migratoria exoskeleton, followed by shaking at 150 rpm for 5 days at 25 ℃.
 
Overall design First, Ngs1-deletion mutants were constructed through homologous-recombination strategy; then, aliquots of 50 mL 10^6 conidia/mL cuticle broth (CB) containing 1% cuticle powder were incubated by shaking at 150 rpm for 5 days at 25 ℃. The cultures were centrifuged by 13,200×g for 1 min at 4 ℃. Hyphal cultures were collected and used for total RNA extracted; subsequently, the extracted RNA were sent to Novogene Company (Beijing, China) for RNA sequencing using Illumina Hiseq 2000.
 
Contributor(s) Zhang L, Yang W
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 13, 2024
Last update date May 31, 2024
Contact name Long-Bin zhang
E-mail(s) 11207029@zju.edu.cn
Organization name Fuzhou University
Department College of Biological Science and Engineering
Lab The Key Laboratory of Marine Enzyme Engineering of Fujian Province
Street address Jianping Road
City Fuzhou
State/province Fujian
ZIP/Postal code 360108
Country China
 
Platforms (1)
GPL16038 Illumina HiSeq 2000 (Beauveria bassiana)
Samples (6)
GSM8264247 Ngs1_CB_5day_rep1
GSM8264248 Ngs1_CB_5day_rep2
GSM8264249 Ngs1_CB_5day_rep3
Relations
BioProject PRJNA1111093

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Supplementary file Size Download File type/resource
GSE267338_RAW.tar 4.5 Mb (http)(custom) TAR (of XLS)
GSE267338_raw_counts.txt.gz 438.4 Kb (ftp)(http) TXT
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Raw data are available in SRA

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