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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 21, 2024 |
| Title |
Members of an array of zinc finger proteins specify distict Hox chromatin boundaries [ChIP-seq] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
In this experiment, we sought to identify how the distribution of RAD21 and ZNF263 change in WT, PATZ1 KO, and ZNF263 KO cells during differentiation of mouse embryonic stem cells (ESCs) into cervical motor neurons (MNs).
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| Overall design |
Examination of RAD21 and ZNF263 binding in embryonic stem cells and cervical motor neurons using ChIP-seq, by status of PATZ1 KO or ZNF263 KO in the cells: WT, ZNF263 KO, and PATZ1 KO
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| Contributor(s) |
Reinberg D |
| Citation(s) |
39173638 |
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| Submission date |
May 06, 2024 |
| Last update date |
Aug 30, 2024 |
| Contact name |
Danny Reinberg |
| Organization name |
University of Miami
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| Department |
Sylvester Cancer Center/Human Genetics
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| Lab |
Reinberg Lab
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| Street address |
1501 NW 10th Ave
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| City |
Miami |
| State/province |
Florida |
| ZIP/Postal code |
33136 |
| Country |
USA |
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| Platforms (1) |
| GPL34328 |
Illumina NovaSeq X (Mus musculus) |
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| Samples (7)
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| GSM8254497 |
ZNF263_KO, Embryonic stem cells, RAD21 |
| GSM8254498 |
WT_E14, Cervical Motor Neurons, RAD21 |
| GSM8254499 |
ZNF263_KO, Cervical Motor Neurons, RAD21 |
| GSM8254500 |
PATZ1_KO, Cervical Motor Neurons, RAD21 |
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| This SubSeries is part of SuperSeries: |
| GSE230482 |
Members of an array of zinc finger proteins specify distinct Hox chromatin boundaries |
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| Relations |
| BioProject |
PRJNA1108323 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE266783_RAW.tar |
1.4 Gb |
(http)(custom) |
TAR (of BW) |
SRA Run Selector |
| Raw data are available in SRA |
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