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GEO accession:
Series GSE266349
Query DataSets for GSE266349
Status
Public on Sep 25, 2024
Title
Remodeling of Il4-Il13-Il5 locus underlies selective gene expression
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
May 01, 2024
Last update date
Sep 30, 2024
Contact name
Maria Morasso
E-mail(s)
morassom@mail.nih.gov
Organization name
NIAMS/NIH
Lab
Laboratory of Skin Biology
Street address
9000 Rockville Pike
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platforms (3)
GPL21493
Illumina HiSeq 3000 (Mus musculus)
GPL24247
Illumina NovaSeq 6000 (Mus musculus)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (138)
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More...
GSM8245254
HN_ATAC_037_human_naiveTh_donor1
GSM8245255
HN_ATAC_038_human_naiveTh_donor2
GSM8245256
HN_ATAC_039_human_naiveTh_donor3
GSM8245257
HN_ATAC_040_human_invitroTh2_nostim_donor1
GSM8245258
HN_ATAC_041_human_invitroTh2_nostim_donor2
GSM8245259
HN_ATAC_042_human_invitroTh2_nostim_donor3
GSM8245260
HN_ATAC_043_human_invitroTh2_PI_4h_donor1
GSM8245261
HN_ATAC_044_human_invitroTh2_PI_4h_donor2
GSM8245262
HN_ATAC_045_human_invitroTh2_PI_4h_donor3
GSM8245263
HN_ATAC_046_ILC2_WT_nostim_4h_rep1
GSM8245264
HN_ATAC_047_ILC2_WT_nostim_4h_rep2
GSM8245265
HN_ATAC_048_ILC2_WT_nostim_4h_rep3
GSM8245266
HN_ATAC_049_ILC2_6.5kbIl13KO_nostim_4h_rep1
GSM8245267
HN_ATAC_050_ILC2_6.5kbIl13KO_nostim_4h_rep2
GSM8245268
HN_ATAC_051_ILC2_6.5kbIl13KO_nostim_4h_rep3
GSM8245269
HN_ATAC_052_ILC2_WT_IL33_NMU_4h_rep1
GSM8245270
HN_ATAC_053_ILC2_WT_IL33_NMU_4h_rep2
GSM8245271
HN_ATAC_054_ILC2_WT_IL33_NMU_4h_rep3
GSM8245272
HN_ATAC_055_ILC2_6.5kbIl13KO_IL33_NMU_4h_rep1
GSM8245273
HN_ATAC_056_ILC2_6.5kbIl13KO_IL33_NMU_4h_rep2
GSM8245274
HN_ATAC_057_ILC2_6.5kbIl13KO_IL33_NMU_4h_rep3
GSM8245385
HN_fHiC_001_Nostim_1h_WT_ILC2_rep1
GSM8245386
HN_fHiC_002_Nostim_1h_WT_ILC2_rep2
GSM8245387
HN_fHiC_003_Nostim_1h_5HSII_ILC2_rep1
GSM8245388
HN_fHiC_004_Nostim_1h_5HSII_ILC2_rep2
GSM8245389
HN_fHiC_005_Nostim_1h_5HSIII_ILC2_rep1
GSM8245390
HN_fHiC_006_Nostim_1h_5HSIII_ILC2_rep2
GSM8245391
HN_fHiC_007_33_NMU_1h_WT_ILC2_rep1
GSM8245392
HN_fHiC_008_33_NMU_1h_WT_ILC2_rep2
GSM8245393
HN_fHiC_009_33_NMU_1h_5HSII_ILC2_rep1
GSM8245394
HN_fHiC_010_33_NMU_1h_5HSII_ILC2_rep2
GSM8245395
HN_fHiC_011_33_NMU_1h_5HSIII_ILC2_rep1
GSM8245396
HN_fHiC_012_33_NMU_1h_5HSIII_ILC2_rep2
GSM8245397
HN_fHiC_037_Nostim_1h_6.5kbIl13_ILC2_rep1
GSM8245398
HN_fHiC_038_Nostim_1h_6.5kbIl13_ILC2_rep2
GSM8245399
HN_fHiC_039_33_NMU_1h_6.5kbIl13_ILC2_rep1
GSM8245400
HN_fHiC_040_33_NMU_1h_6.5kbIl13_ILC2_rep2
GSM8245401
HN_fHiC_041_Nostim_1h_WT_ILC2_rep1
GSM8245402
HN_fHiC_042_Nostim_1h_WT_ILC2_rep2
GSM8245403
HN_fHiC_043_33_NMU_1h_WT_ILC2_rep1
GSM8245404
HN_fHiC_044_33_NMU_1h_WT_ILC2_rep2
GSM8245443
HN_BL_179_invitroTh2_Nostim_4h_rep1
GSM8245444
HN_BL_180_invitroTh2_Nostim_4h_rep2
GSM8245445
HN_BL_181_invitroTh2_CD3_CD28_4h_rep1
GSM8245446
HN_BL_182_invitroTh2_CD3_CD28_4h_rep2
GSM8245447
HN_BL_183_human_naiveTh_donor1
GSM8245448
HN_BL_184_human_naiveTh_donor2
GSM8245449
HN_BL_185_human_naiveTh_donor3
GSM8245450
HN_BL_186_human_invitroTh2_nostim_donor1
GSM8245451
HN_BL_187_human_invitroTh2_nostim_donor2
GSM8245452
HN_BL_188_human_invitroTh2_nostim_donor3
GSM8245453
HN_BL_189_human_invitroTh2_PI_4h_donor1
GSM8245454
HN_BL_190_human_invitroTh2_PI_4h_donor2
GSM8245455
HN_BL_191_human_invitroTh2_PI_4h_donor3
GSM8249245
HN_HiC_001_33_NMU_1h_ILC2_rep1
GSM8249246
HN_HiC_002_Nostim_1h_ILC2_rep1
GSM8249247
HN_HiC_003_Nostim_1h_ILC2_rep2
GSM8249248
HN_HiC_004_33_NMU_1h_ILC2_rep2
GSM8249249
HN_HiC_005_Nostim_1h_Th2_rep1
GSM8249250
HN_HiC_006_Nostim_1h_Th2_rep2
GSM8249251
HN_HiC_007_CD3_CD28_1h_Th2_rep1
GSM8249252
HN_HiC_008_CD3_CD28_1h_Th2_rep2
GSM8249253
HN_HiC_051_human_invitroTh2_nostim_donor1
GSM8249254
HN_HiC_052_human_invitroTh2_nostim_donor3
GSM8249255
HN_HiC_053_human_invitroTh2_PI_4h_donor1
GSM8249256
HN_HiC_054_human_invitroTh2_PI_4h_donor3
GSM8536592
HN_ChIP_041_Pol_II_Nostim_1h_ILC2_rep1
GSM8536593
HN_ChIP_042_p300_Nostim_1h_ILC2_rep1
GSM8536594
HN_ChIP_043_GATA3_Nostim_1h_ILC2_rep1
GSM8536595
HN_ChIP_044_p65_Nostim_1h_ILC2_rep1
GSM8536596
HN_ChIP_045_NFAT1_Nostim_1h_ILC2_rep1
GSM8536597
HN_ChIP_047_CTCF_Nostim_1h_ILC2_rep1
GSM8536598
HN_ChIP_048_Input_Nostim_1h_ILC2_rep1
GSM8536599
HN_ChIP_057_Pol_II_33_NMU_1h_ILC2_rep1
GSM8536600
HN_ChIP_058_p300_33_NMU_1h_ILC2_rep1
GSM8536601
HN_ChIP_059_GATA3_33_NMU_1h_ILC2_rep1
GSM8536602
HN_ChIP_060_p65_33_NMU_1h_ILC2_rep1
GSM8536603
HN_ChIP_061_NFAT1_33_NMU_1h_ILC2_rep1
GSM8536604
HN_ChIP_063_CTCF_33_NMU_1h_ILC2_rep1
GSM8536605
HN_ChIP_064_Input_33_NMU_1h_ILC2_rep1
GSM8536606
HN_ChIP_073_Pol_II_Nostim_1h_ILC2_rep2
GSM8536607
HN_ChIP_074_p300_Nostim_1h_ILC2_rep2
GSM8536608
HN_ChIP_075_GATA3_Nostim_1h_ILC2_rep2
GSM8536609
HN_ChIP_076_p65_Nostim_1h_ILC2_rep2
GSM8536610
HN_ChIP_077_NFAT1_Nostim_1h_ILC2_rep2
GSM8536611
HN_ChIP_079_CTCF_Nostim_1h_ILC2_rep2
GSM8536612
HN_ChIP_080_Input_Nostim_1h_ILC2_rep2
GSM8536613
HN_ChIP_089_Pol_II_33_NMU_1h_ILC2_rep2
GSM8536614
HN_ChIP_090_p300_33_NMU_1h_ILC2_rep2
GSM8536615
HN_ChIP_091_GATA3_33_NMU_1h_ILC2_rep2
GSM8536616
HN_ChIP_092_p65_33_NMU_1h_ILC2_rep2
GSM8536617
HN_ChIP_093_NFAT1_33_NMU_1h_ILC2_rep2
GSM8536618
HN_ChIP_095_CTCF_33_NMU_1h_ILC2_rep2
GSM8536619
HN_ChIP_096_Input_33_NMU_1h_ILC2_rep2
GSM8536620
HN_ChIP_143_Pol_II_Nostim_1h_Th2_rep1
GSM8536621
HN_ChIP_144_p300_Nostim_1h_Th2_rep1
GSM8536622
HN_ChIP_145_GATA3_Nostim_1h_Th2_rep1
GSM8536623
HN_ChIP_146_p65_Nostim_1h_Th2_HN_rep1
GSM8536624
HN_ChIP_147_NFAT1_Nostim_1h_Th2_rep1
GSM8536625
HN_ChIP_149_CTCF_Nostim_1h_Th2_rep1
GSM8536626
HN_ChIP_154_Input_Nostim_1h_Th2_rep1
GSM8536627
HN_ChIP_155_Pol_II_CD3_CD28_1h_Th2_rep1
GSM8536628
HN_ChIP_156_p300_CD3_CD28_1h_Th2_rep1
GSM8536629
HN_ChIP_157_GATA3_CD3_CD28_1h_Th2_rep1
GSM8536630
HN_ChIP_158_p65_CD3_CD28_1h_Th2_rep1
GSM8536631
HN_ChIP_159_NFAT1_CD3_CD28_1h_Th2_rep1
GSM8536632
HN_ChIP_161_CTCF_CD3_CD28_1h_Th2_rep1
GSM8536633
HN_ChIP_166_Input_CD3_CD28_1h_Th2_rep1
GSM8536634
HN_ChIP_167_Pol_II_Nostim_1h_Th2_rep2
GSM8536635
HN_ChIP_168_p300_Nostim_1h_Th2_rep2
GSM8536636
HN_ChIP_169_GATA3_Nostim_1h_Th2_rep2
GSM8536637
HN_ChIP_170_p65_Nostim_1h_Th2_rep2
GSM8536638
HN_ChIP_171_NFAT1_Nostim_1h_Th2_rep2
GSM8536639
HN_ChIP_173_CTCF_Nostim_1h_Th2_rep2
GSM8536640
HN_ChIP_178_Input_Nostim_1h_Th2_rep2
GSM8536641
HN_ChIP_179_Pol_II_CD3_CD28_1h_Th2_rep2
GSM8536642
HN_ChIP_180_p300_CD3_CD28_1h_Th2_rep2
GSM8536643
HN_ChIP_181_GATA3_CD3_CD28_1h_Th2_rep2
GSM8536644
HN_ChIP_182_p65_CD3_CD28_1h_Th2_rep2
GSM8536645
HN_ChIP_183_NFAT1_CD3_CD28_1h_Th2_rep2
GSM8536646
HN_ChIP_185_CTCF_CD3_CD28_1h_Th2_rep2
GSM8536647
HN_ChIP_190_Input_CD3_CD28_1h_Th2_rep2
GSM8536648
HN_ChIP_305_Rad21_Nostim_1h_Th2_rep1
GSM8536649
HN_ChIP_306_Rad21_Nostim_1h_Th2_rep2
GSM8536650
HN_ChIP_307_Rad21_CD3_CD28_1h_Th2_rep1
GSM8536651
HN_ChIP_308_Rad21_CD3_CD28_1h_Th2_rep2
GSM8536652
HN_ChIP_309_Rad21_Nostim_1h_ILC2_rep1
GSM8536653
HN_ChIP_310_Rad21_Nostim_1h_ILC2_rep2
GSM8536654
HN_ChIP_311_Rad21_33_NMU_1h_ILC2_rep1
GSM8536655
HN_ChIP_312_Rad21_33_NMU_1h_ILC2_rep2
GSM8536656
HN_ChIP_313_Input_Nostim_1h_Th2_rep1
GSM8536657
HN_ChIP_314_Input_Nostim_1h_Th2_rep2
GSM8536658
HN_ChIP_315_Input_CD3_CD28_1h_Th2_rep1
GSM8536659
HN_ChIP_316_Input_CD3_CD28_1h_Th2_rep2
GSM8536660
HN_ChIP_317_Input_Nostim_1h_ILC2_rep1
GSM8536661
HN_ChIP_318_Input_Nostim_1h_ILC2_rep2
GSM8536662
HN_ChIP_319_Input_33_NMU_1h_ILC2_HN_rep1
GSM8536663
HN_ChIP_320_Input_33_NMU_1h_ILC2_HN_rep2
This SuperSeries is composed of the following SubSeries:
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GSE266341
Remodeling of Il4-Il13-Il5 locus underlies selective gene expression (ATAC-Seq)
GSE266345
Remodeling of Il4-Il13-Il5 locus underlies selective gene expression (fHiC)
GSE266347
Remodeling of Il4-Il13-Il5 locus underlies selective gene expression (mRNA-Seq)
GSE266529
Remodeling of Il4-Il13-Il5 locus underlies selective gene expression [Hi-C]
GSE277978
Remodeling of Il4-Il13-Il5 locus underlies selective gene expression (ChIP-seq)
Relations
BioProject
PRJNA1106796
Download family
Format
SOFT formatted family file(s)
SOFT
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TXT
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GSE266349_RAW.tar
76.4 Gb
(http)
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TAR (of BED, BW, HIC)
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