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Series GSE265904 Query DataSets for GSE265904
Status Public on May 30, 2024
Title GLUT1 overexpression enhances CAR T cell metabolic fitness and anti-tumor efficacy
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The tumor microenvironment presents many obstacles to effective CAR T cell therapy, including glucose competition from tumor and myeloid cells. Using mouse models of acute lymphoblastic leukemia (ALL), renal cell carcinoma (RCC), and glioblastoma (GBM), we show that enforced expression of the glucose transporter GLUT1 enhances anti-tumor efficacy and promotes favorable CAR T cell phenotypes for two clinically relevant CAR designs, 19-28z and IL13Ra2-BBz. In the NALM6 ALL model, 19-28z-GLUT1 promotes Tscm formation and prolongs survival. RNA sequencing of these CAR T cells reveals that overexpression of GLUT1, but not GLUT3, enriches for genes involved in glycolysis, mitochondrial respiration, and memory precursor phenotypes. Extending these data, 19-28z-GLUT1 CAR T cells improve tumor control and response to rechallenge in an RCC patient derived xenograft model. Furthermore, IL13Ra2-BBz CAR T cells overexpressing GLUT1 prolong survival of mice bearing orthotopic GBMs and exhibit decreased exhaustion markers. This novel engineering approach can offer a competitive advantage to CAR T cells in harsh tumor environments where glucose is limiting.
 
Overall design To understand what led to the improved anti-tumor efficacy of 19-28z-GLUT1 CAR T cells, we performed SMARTer-RNA-seq on flow-sorted CAR T cells from bone marrow at 7 days after CAR T cell infusion
 
Contributor(s) Shi Y, Kotchetkov IS
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Submission date Apr 25, 2024
Last update date May 30, 2024
Contact name Yuzhe Shi
E-mail(s) shiy3@mskcc.org
Organization name Memorial Sloan Kettering Cancer Center
Department Immunolgy
Lab Sadelain Lab
Street address 1250 First Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (8)
GSM8231232 Sample_LNGFR-1_IGO_13922_B_1
GSM8231233 Sample_LNGFR-2_IGO_13922_B_2
GSM8231234 Sample_LNGFR-3_IGO_13922_B_3
Relations
BioProject PRJNA1104654

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE265904_raw_counts.txt.gz 683.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA

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