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Series GSE26535 Query DataSets for GSE26535
Status Public on Feb 01, 2011
Title Complementary patterns of gene expression by human oligodendrocyte progenitors and their environment predict determinants of progenitor maintenance and differentiation.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary OBJECTIVE: Glial progenitor cells are abundant in adult human white matter. This study was designed to identify signaling pathways regulating their self-renewal and fate.

METHODS: We compared the transcriptional profiles of freshly sorted adult human white matter progenitor cells (WMPCs), purified by A2B5-based immunomagnetic sorting, with those of the white matter from which they derived.

RESULTS: We identified 132 genes differentially expressed by WMPCs; these included principal components of five receptor-defined signaling pathways, represented by platelet derived growth factor receptor alpha (PDGFRA) and type 3 fibroblast growth factor receptor (FGFR3), receptor tyrosine phosphatase-beta/zeta (RTPZ), notch, and syndecan3. WMPCs also differentially expressed the bone morphogenetic protein 4 (BMP4) inhibitors neuralin and BAMBI (BMP and activin membrane-bound inhibitor), suggesting tonic defense against BMP signaling. Differential overexpression of RTPZ was accompanied by that of its modulators pleiotrophin, NrCAM, tenascin, and the chondroitin sulfate proteoglycans, suggesting the importance of RTPZ signaling to WMPCs. When exposed to the RTPZ inhibitor bpV(phen), or lentiviral-shRNAi against RTPZ, WMPCs differentiated as oligodendrocytes. Conversely, when neuralin and BAMBI were antagonized by BMP4, astrocytic differentiation was induced, which was reversible by noggin.

INTERPRETATION: The RTPZ and BMP pathways regulate the self-maintenance of adult human WMPCs, and can be modulated to induce their oligodendrocytic or astrocytic differentiation. As such, they provide targets by which to productively mobilize resident progenitor cells of the adult human brain.
 
Overall design 6 samples, three biological replicates (individual patients), 2 groups (A2B5+ and unsorted cells).
 
Contributor(s) Sim FJ, Lang JK, Waldau B, Schwartz TE, Pilcher WH, Chandross KJ, Natesan S, Merrill JE, Goldman SA
Citation(s) 16634042
Submission date Jan 10, 2011
Last update date Dec 13, 2018
Contact name Fraser James Sim
E-mail(s) fjsim@buffalo.edu
Phone 7168292151
Organization name University at Buffalo
Department Pharmacology
Street address 3435 Main Street
City Buffalo
State/province NY
ZIP/Postal code 14216
Country USA
 
Platforms (1)
GPL8300 [HG_U95Av2] Affymetrix Human Genome U95 Version 2 Array
Samples (6)
GSM652330 A2B5+ WMPCs (patient 1)
GSM652354 Unsorted WM (patient 1)
GSM652355 A2B5+ WMPCs (patient 2)
Relations
BioProject PRJNA136657

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE26535_RAW.tar 42.1 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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