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| Status |
Public on Apr 16, 2024 |
| Title |
A fine kinetic balance of interactions directs transcription factor hubs to genes |
| Organism |
Drosophila melanogaster |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
38659757 |
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| Submission date |
Apr 16, 2024 |
| Last update date |
Oct 29, 2024 |
| Contact name |
Mustafa Mir |
| E-mail(s) |
MIRM@chop.edu
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| Organization name |
Children's Hospital of Philadelphia
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| Street address |
3501 Civic Center Boulevard, CTRB 9030
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| City |
philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
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| Platforms (1) |
| GPL25244 |
Illumina NovaSeq 6000 (Drosophila melanogaster) |
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| Samples (49)
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| GSM8208537 |
WT,day2,rep1 |
| GSM8208538 |
WT,day2,rep2 |
| GSM8208539 |
WT,day2,rep3 |
| GSM8208540 |
WT,day2,rep4 |
| GSM8208541 |
WT,day2,rep5 |
| GSM8208542 |
WT,day2,rep6 |
| GSM8208543 |
Zf5,day2,rep1 |
| GSM8208544 |
Zf5,day2,rep2 |
| GSM8208545 |
Zf5,day2,rep3 |
| GSM8208546 |
Zf5,day2,rep4 |
| GSM8208547 |
Zf5,day2,rep5 |
| GSM8208548 |
Zf5,day2,rep6 |
| GSM8208549 |
Zf5,day1,rep1 |
| GSM8208550 |
Zf5,day1,rep2 |
| GSM8208551 |
Zf5,day1,rep3 |
| GSM8208552 |
WT,day1,rep1 |
| GSM8208553 |
WT,day1,rep2 |
| GSM8208554 |
WT,day1,rep3 |
| GSM8208557 |
C&R,Zf5,Gaf,Rep1 |
| GSM8208558 |
C&R,Zf5,Gaf,Rep2 |
| GSM8208559 |
C&R,WT,Gaf,Rep3 |
| GSM8208560 |
C&R,Zf5,IgG,Rep1 |
| GSM8208561 |
C&R,Zf5,IgG,Rep2 |
| GSM8208562 |
C&R,WT,Zld,Rep1 |
| GSM8208563 |
C&R,WT,Zld,Rep2 |
| GSM8208564 |
C&R,WT,Zld,Rep3 |
| GSM8208565 |
C&R,Zf5,Zld,Rep1 |
| GSM8208566 |
C&R,Zf5,Zld,Rep2 |
| GSM8208567 |
C&R,Zf5,Zld,Rep3 |
| GSM8208568 |
C&R,Zf5,Zld,Rep4 |
| GSM8208569 |
C&R,Zf5,Zld,Rep5 |
| GSM8208570 |
C&R,Zf5,Zld,Rep6 |
| GSM8593216 |
Zld294,day3,rep1 |
| GSM8593217 |
Zld294,day3,rep2 |
| GSM8593218 |
Zld294,day3,rep3 |
| GSM8593219 |
Zld294,day3,rep4 |
| GSM8593220 |
Zld294,day3,rep5 |
| GSM8593221 |
Zld294,day3,rep6 |
| GSM8593222 |
Zld294,day3,rep7 |
| GSM8593223 |
Zld294,day3,rep8 |
| GSM8596597 |
ATAC,Zld294,rep1 |
| GSM8596598 |
ATAC,Zld294,rep2 |
| GSM8596599 |
ATAC,Zld294,rep3 |
| GSM8596600 |
ATAC,Zld294,rep4 |
| GSM8596601 |
ATAC,Zld294,rep5 |
| GSM8596602 |
ATAC,Zld294,rep6 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE263718 |
A fine kinetic balance of interactions directs transcription factor hubs to genes [ATAC-Seq] |
| GSE263997 |
A fine kinetic balance of interactions directs transcription factor hubs to genes [RNA-Seq] |
| GSE263999 |
A fine kinetic balance of interactions directs transcription factor hubs to genes [Cut and Run] |
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| Relations |
| BioProject |
PRJNA1100976 |
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