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Series GSE263806 Query DataSets for GSE263806
Status Public on Sep 26, 2024
Title Overcoming amphotericin B resistance in Candida auris using the antiemetic drug, rolapitant
Organism Candidozyma auris
Experiment type Expression profiling by high throughput sequencing
Summary The emergence of Candida auris poses a significant health challenge that has led to a new era of multidrug-resistant fungal infections. Invasive infections caused by C. auris are usually associated with remarkable morbidity and mortality. For many years, amphotericin B (AmB) remained the most efficient and the last line of treatment against most hard-to-treat fungal infections. However, strains of C. auris possess extraordinary resistance to most antifungal agents, including AmB. In this study, we screened ~2600 FDA-approved drugs and clinical compounds to identify the antiemetic drug rolapitant as a promising enhancer to AmB against C. auris. Rolapitant exhibited potent synergistic interactions with AmB against all tested (29/29) C. auris isolates. In a time-kill assay, rolapitant restored the fungicidal activity of AmB within 4 h. Additionally, the synergistic relationship between rolapitant and AmB was observed against other medically crucial Candida, Cryptococcus and Aspergillus species with Ī£FICI that ranged from 0.16 to 0.5. In a transcriptomic study, ion transporters and ATP generation were identified as primary pathways impacted in C. auris AR0390 cells exposed to rolapitant. An ATP luminescence assay confirmed that rolapitant, at sub-inhibitory concentrations, significantly interfered with ATP production in C. auris. Moreover, rolapitant enhanced the in vivo activity of AmB in a mouse model of disseminated C. auris infection, as the combination reduced the fungal burden in murine kidneys by ~1 log (~90%) colony forming units. Our findings warrant further investigation of using rolapitant to overcome AmB resistance in C. auris and other fungal species.
 
Overall design Samples GSM7806557, GSM7806558 and GSM7806559 from GSE244094 were used as the controls:
GSM7806557 DMSO sample 1 [A4] SRX21897801 SAMN37548903
GSM7806558 DMSO sample 2 [A5] SRX21897802 SAMN37548902
GSM7806559 DMSO sample 3 [A6] SRX21897803 SAMN37548901
 
Contributor(s) Salama EA, Elgammal Y, Lanman NA, Utturkar SM, Hazbun TR, Seleem MN
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 11, 2024
Last update date Sep 26, 2024
Contact name Sagar M Utturkar
E-mail(s) sutturka@purdue.edu
Organization name Purdue University
Department Institute for Cancer Research
Lab C3B
Street address 201 S University St
City West Lafayette
State/province IN
ZIP/Postal code 47906
Country USA
 
Platforms (1)
GPL28368 Illumina NovaSeq 6000 ([Candida] auris)
Samples (3)
GSM8199446 ROL sample 1 [C4]
GSM8199447 ROL sample 2 [C5]
GSM8199448 ROL sample 3 [C6]
Relations
Reanalysis of GSM7806557
Reanalysis of GSM7806558
Reanalysis of GSM7806559
BioProject PRJNA1099273

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE263806_raw_counts.xlsx 280.2 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA

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