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Series GSE262893 Query DataSets for GSE262893
Status Public on Jun 24, 2024
Title Interuption of Klf5 acetylaiton at K358 affects tumor microenvironment in Pten deficient mouse prostates
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary PTEN deficiency induces KLF5 acetylation; and the interruption of KLF5 acetylation orchestrates intricate interactions between cancer cells and CAFs that enhance FGFR1 signaling and promote tumor growth. Deacetylated KLF5 promotes tumor cells to secrete TNF, which stimulates inflammatory CAFs to release FGF9. Single-cell transcriptomic analysis reveals an enhanced FGF signaling from fibroblasts to cancer cells after the interruption of Klf5 acetylation.
 
Overall design The mouse prostates of 16-week-old PBCre;Pten-/-;Klf5KR/KR (KR) and PBCre;Pten-/-;Klf5+/+ (WT) were dissected and minced for scRNA-seq
Web link https://pubmed.ncbi.nlm.nih.gov/38781024/
 
Contributor(s) Zhang B, Liu M, Mai F, Ding W, Dong J
Citation(s) 38781024
BioProject PRJNA1094424
Submission date Mar 31, 2024
Last update date Jun 25, 2024
Contact name Jin-Tang Dong
E-mail(s) dongjt@sustech.edu.cn
Organization name Southern University of Science and Technology
Department Human Cell Biology and Genetics
Street address 1088 Xueyuan Blvd
City Shenzhen
State/province Guangdong
ZIP/Postal code 518055
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM8181179 scRNA-seqforKLF5WTmouseprostateMouse1
GSM8181180 scRNA-seqforKLF5WTmouseprostateMouse2
GSM8181181 scRNA-seqforKLF5KRmouseprostateMouse1

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE262893_RAW.tar 711.0 Mb (http)(custom) TAR (of MTX, TSV)
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Raw data are available in SRA

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