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Series GSE262852 Query DataSets for GSE262852
Status Public on Apr 03, 2024
Title Neoantigen-Augmented iPSC-based Cancer Vaccine Combined with Local Radiotherapy Promotes Systemic Antitumor Immunity in Poorly Immunogenic Cancers
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Although irradiated induced-pluripotent stem cells (iPSCs) as a prophylactic cancer vaccine elicit an antitumor immune response, the therapeutic efficacy of iPSC-based cancer vaccines is not promising due to their insufficient antigenicity and the immunosuppressive tumor microenvironment. Here, we found that neoantigen-engineered iPSC cancer vaccines can trigger neoantigen-specific T cell responses to eradicate cancer cells and increase the therapeutic efficacy of RT in poorly immunogenic colorectal cancer (CRC) and triple-negative breast cancer (TNBC). We generated neoantigen-augmented iPSCs (NA-iPSCs) by engineering AAV2 vector carrying murine neoantigens and evaluated their therapeutic efficacy in combination with radiotherapy. After administration of NA-iPSC cancer vaccine and radiotherapy, we found that ~60% of tumor-bearing mice achieved a complete response in microsatellite-stable CRC model. Furthermore, splenocytes from mice treated with NA-iPSC plus RT produced high levels of IFN secretion in response to neoantigens and had a greater cytotoxicity to cancer cells, suggesting that the NA-iPSC vaccine combined with radiotherapy elicited a superior neoantigen-specific T-cell response to eradicate cancer cells. The superior therapeutic efficacy of NA-iPSCs engineered by mouse TNBC neoantigens was also observed in the syngeneic immunocompetent TNBC mouse model. We found that the risk of spontaneous lung and liver metastasis was dramatically decreased by NA-iPSCs plus RT in the TNBC animal model. Altogether, these results indicated that autologous iPSC cancer vaccines engineered by neoantigens can elicit a high neoantigen-specific T-cell response, promote tumor regression and reduce the risk of distant metastasis in combination with local radiotherapy.
 
Overall design Examination of expression and mutation-associated antigens (neoantigens) profile of murine (CT26) colorectal cancer cells treated with iPSC cancer vaccine (iPSC-Vac). In the experiment, the impact of mouse irradiated iPSC cancer vaccine on neoantigen-bearing gene profiles was monitored. The experiment had 2 samples (CT26, CT26-iPSC-Vac). CT26 samples were used as the reference sample to compare. An analysis was also performed on RNA extracted from tumor samples (CT26 cells grown in the back of Balb/c mice, subcatenous injected with mouse irradiated iPSC cancer vaccine).
 
Contributor(s) Huang KC, Chen WT, Chen J, Lee C, Wu C, Lai C, Yang P, Liang J, Shiau A, Chao KS, Ke T
Citation(s) 38821980
Submission date Mar 29, 2024
Last update date Jul 03, 2024
Contact name Kevin Chih-Yang Huang
Organization name China Medical University
Department Department of Biomedical Imaging and Radiological Science
Street address No. 91, Xueshi Road, North District
City Taichung City
ZIP/Postal code 404328
Country Taiwan
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM8180504 CT26
GSM8180505 CT26-iPSC-Vac
Relations
BioProject PRJNA1093483

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Supplementary file Size Download File type/resource
GSE262852_CT26_exp.tsv.gz 324.2 Kb (ftp)(http) TSV
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