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Series GSE261669 Query DataSets for GSE261669
Status Public on Aug 31, 2024
Title Reproductive biomarker response to PFAS-contaminated groundwater [liver]
Organism Pimephales promelas
Experiment type Expression profiling by array
Summary The use of aqueous film-forming foams (AFFF) at fire-training areas (FTAs) has introduced into ground- and surface waters a complex mixture of per- and poly-fluorinated alkyl substances (PFAS). The toxicity of environmental PFAS mixtures to wildlife is not well understood and presents a knowledge gap that limits accurate risk assessment. To evaluate reproductive biomarker responses to complex environmental PFAS mixtures, we conducted a series of on-site experiments using flow-through mobile laboratories exposing fish to groundwater impacted by a legacy FTA and an adjacent reference site
A 60K fathead minnow microarray was used to quantify gene expression patterns in the testis and liver of fish exposed to water from Fire Training Area 1 and 2 relative to a reference site.
 
Overall design Fathead minnows were exposed to ground water in a mobile laboratory at the fire training areas. Sample sizes included the following: Reference site (n=6), Control effluent (n=8), FTA-1 (n=5), FTA-2 (n=6) and FTA-2/Ref (50/50 mix) (n=6).
 
Contributor(s) Vajda AM, Jenkins JA, Bertolatus DW, Keefe SH, LeBlanc DR, Dethloff AR, Martyniuk CJ, Miller CS, Lohman R, Barber LB
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Submission date Mar 14, 2024
Last update date Aug 31, 2024
Contact name Christopher Martyniuk
E-mail(s) cmartyn@ufl.edu
Organization name University of Florida
Department Physiological Sciences
Lab Martyniuk
Street address 2063 Mowry
City Gainesville
State/province Florida
ZIP/Postal code 32608
Country USA
 
Platforms (1)
GPL15775 Agilent-036574 FHM_8x60K_V2
Samples (31)
GSM8148296 Cntl_65_liver
GSM8148297 FTA_2_REF_77_liver
GSM8148298 Cntl_67_liver
Relations
BioProject PRJNA1088243

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE261669_RAW.tar 90.6 Mb (http)(custom) TAR (of TXT)

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