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Series GSE261001 Query DataSets for GSE261001
Status Public on Sep 27, 2024
Title Transcriptional effects of VIP on murine intestinal stem cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In our study, we investigated the effect of Vasoactive intestinal peptide (VIP) on murine intestinal stem cell (ISC) activity and differentiation in homeostatic conditions and following irradiation-induced injury. We utilized a model of murine intestinal organoids and observed that VIP promotes epithelial differentiation towards a secretory phenotype predominantly via the p38 MAPK pathway. Moreover, VIP prominently modulates epithelial proliferation as well as the number and proliferative activity of Lgr5-EGFP+ ISC under homeostatic conditions. Further analysis revealed that in vitro acute irradiation injury renders Lgr5-EGFP+ ISC even more susceptible to modulations by VIP, which results in the strong promotion of epithelial regeneration by VIP. Finally, these effects by VIP translate into an in vivo model of abdominal irradiation, where VIP was shown to prominently mitigate radiation-induced injury. Taken together, our findings indicate a prominent role of VIP in modulating ISC behavior in intestinal homeostasis and its potential to promote intestinal regeneration following acute irradiation injury.
 
Overall design Bulk gene expression data are presented for whole VIP-treated (n=4) or untreated (n=3) organoids, for sorted Lgr5-EGFP+ cells from VIP-treated (n=4) or untreated (n=4) organoids and for sorted Lgr5-EGFP+ cells from VIP-treated (n=4) or untreated (n=4) organoids exposed to irradiation.
 
Contributor(s) Agibalova T, Maurer HC, Middelhoff M
Citation(s) 39380035
Submission date Mar 06, 2024
Last update date Oct 09, 2024
Contact name Hans Carlo Maurer
Organization name Klinikum rechts der Isar
Department II. Medizinische Klinik
Street address Ismaninger Str. 22
City Munich
State/province Bavaria
ZIP/Postal code 81675
Country Germany
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (37)
GSM8131878 m40061-control-BR1-TR1
GSM8131879 m40061-control-BR1-TR2
GSM8131880 m40061-vip-BR1-TR1
Relations
BioProject PRJNA1084810

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE261001_325TA_mouse_counts.txt.gz 379.1 Kb (ftp)(http) TXT
GSE261001_501TA_mouse_counts.txt.gz 185.4 Kb (ftp)(http) TXT
GSE261001_543TA_mouse_counts.txt.gz 396.2 Kb (ftp)(http) TXT
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