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Series GSE259408 Query DataSets for GSE259408
Status Public on Apr 05, 2024
Title Acidovorax temperans polarizes T17 cells and skews neutrophil maturation to promote lung adenocarcinoma development
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Dysbiosis, or changes within the microbiome, is a common feature of solid tumors, however whether this dysbiosis directly contributes to tumor development is largely unknown. We previously characterized the human lung cancer microbiome and identified the Gram-negative Acidovorax temperans as enriched in tumors and associated with smoking status and TP53 mutations. To determine if A. temperans exposure could contribute to the development of lung cancer, we investigated its effect in a genetically engineered mouse model of lung adenocarcinoma driven by mutant Kras and Tp53. In comparison to control mice and those instilled with a commensal species Lactobacillus gasseri, we found that repeated A. temperans exposure accelerates tumor development and burden through infiltration of proinflammatory cells in the lungs. Comparing immune cell infiltrates at two timepoints revealed increased proinflammatory cells immediately following A. temperans instillation while later the number of T cells, especially IL-17+ cells, was increased. These data indicate a clear role for microbiota-induced inflammation as a key mechanism in the development of lung cancer, demonstrating that dysbiosis contributes to tumor growth.
 
Overall design Acidovorax teemperans, dysbiotic in human lungs, was repeatedly instilled into the lungs of mice bearing K-ras/p53 mtuations, to accelerate lung adenocarcinoma development. Lungs were harvested and RNA was extracted from tumors for sequencing.
 
Contributor(s) Stone J, Khan M, Harris C
Citation(s) 38570533
Submission date Feb 27, 2024
Last update date Apr 05, 2024
Contact name Josh Stone
E-mail(s) josh.stone@nih.gov, harrisc@nih.gov, khanm@mail.nih.gov
Phone 240-760-7261
Organization name National Cancer Institue
Department CCR
Lab LHC
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (45)
GSM8115711 Acido_Wk10B
GSM8115712 Acido_Wk10F
GSM8115713 Acido_Wk14B
Relations
BioProject PRJNA1081431

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE259408_KP_mouse_bulk_FPKM.txt.gz 2.2 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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