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Series GSE256906

Query DataSets for GSE256906

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR139HZF)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic flies expressing CG14441-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR139HZF/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 24, 2024

Last update date

Sep 25, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL25244

Illumina NovaSeq 6000 (Drosophila melanogaster)

Samples (2)

GSM8106768	TF ChIP-seq from whole organism (ENCLB570RJH)
GSM8106769	TF ChIP-seq from whole organism (ENCLB305QOW)

Relations

Reanalyzed by

GSE278063

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE256906_ENCFF207TGU_fold_change_over_control_dm6.bigWig	326.9 Mb	(ftp)(http)	BIGWIG
GSE256906_ENCFF208TBG_conservative_IDR_thresholded_peaks_dm6.bigBed	198.9 Kb	(ftp)(http)	BIGBED
GSE256906_ENCFF312FEZ_IDR_thresholded_peaks_dm6.bed.gz	101.6 Kb	(ftp)(http)	BED
GSE256906_ENCFF379VFL_signal_p-value_dm6.bigWig	268.6 Mb	(ftp)(http)	BIGWIG
GSE256906_ENCFF493WMF_conservative_IDR_thresholded_peaks_dm6.bed.gz	89.6 Kb	(ftp)(http)	BED
GSE256906_ENCFF656BAY_IDR_thresholded_peaks_dm6.bigBed	215.5 Kb	(ftp)(http)	BIGBED
GSE256906_ENCFF823RIZ_IDR_ranked_peaks_dm6.bed.gz	5.8 Mb	(ftp)(http)	BED
GSE256906_ENCFF941QSK_IDR_ranked_peaks_dm6.bed.gz	5.4 Mb	(ftp)(http)	BED
GSE256906_RAW.tar	995.1 Mb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA