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Series GSE256864

Query DataSets for GSE256864

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR213XWH)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic flies expressing CG17328-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR213XWH/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 24, 2024

Last update date

Sep 25, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL25244

Illumina NovaSeq 6000 (Drosophila melanogaster)

Samples (2)

GSM8106698	TF ChIP-seq from whole organism (ENCLB693OOA)
GSM8106699	TF ChIP-seq from whole organism (ENCLB516TVT)

Relations

Reanalyzed by

GSE278063

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE256864_ENCFF045HSX_conservative_IDR_thresholded_peaks_dm6.bigBed	213.6 Kb	(ftp)(http)	BIGBED
GSE256864_ENCFF136ZGA_IDR_thresholded_peaks_dm6.bigBed	221.0 Kb	(ftp)(http)	BIGBED
GSE256864_ENCFF274VPK_fold_change_over_control_dm6.bigWig	290.1 Mb	(ftp)(http)	BIGWIG
GSE256864_ENCFF453GED_IDR_ranked_peaks_dm6.bed.gz	5.5 Mb	(ftp)(http)	BED
GSE256864_ENCFF565JFK_conservative_IDR_thresholded_peaks_dm6.bed.gz	100.0 Kb	(ftp)(http)	BED
GSE256864_ENCFF598EOB_IDR_thresholded_peaks_dm6.bed.gz	105.7 Kb	(ftp)(http)	BED
GSE256864_ENCFF869JXM_IDR_ranked_peaks_dm6.bed.gz	5.5 Mb	(ftp)(http)	BED
GSE256864_ENCFF942MIL_signal_p-value_dm6.bigWig	251.7 Mb	(ftp)(http)	BIGWIG
GSE256864_RAW.tar	892.8 Mb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA