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Series GSE256815

Query DataSets for GSE256815

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR304JBT)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic flies expressing lov-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR304JBT/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 24, 2024

Last update date

Sep 25, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL25244

Illumina NovaSeq 6000 (Drosophila melanogaster)

Samples (3)

GSM8106597	TF ChIP-seq from whole organism (ENCLB884CKK)
GSM8106598	TF ChIP-seq from whole organism (ENCLB229EGM)
GSM8106599	TF ChIP-seq from whole organism (ENCLB666ARH)

Relations

Reanalyzed by

GSE278063

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE256815_ENCFF153EKK_IDR_thresholded_peaks_dm6.bigBed	175.2 Kb	(ftp)(http)	BIGBED
GSE256815_ENCFF208RWW_signal_p-value_dm6.bigWig	297.0 Mb	(ftp)(http)	BIGWIG
GSE256815_ENCFF279CRM_conservative_IDR_thresholded_peaks_dm6.bigBed	138.8 Kb	(ftp)(http)	BIGBED
GSE256815_ENCFF328SXT_IDR_thresholded_peaks_dm6.bigBed	116.5 Kb	(ftp)(http)	BIGBED
GSE256815_ENCFF366BED_IDR_thresholded_peaks_dm6.bigBed	119.1 Kb	(ftp)(http)	BIGBED
GSE256815_ENCFF452ISW_conservative_IDR_thresholded_peaks_dm6.bed.gz	50.9 Kb	(ftp)(http)	BED
GSE256815_ENCFF532CVP_IDR_ranked_peaks_dm6.bed.gz	6.0 Mb	(ftp)(http)	BED
GSE256815_ENCFF536JOP_IDR_ranked_peaks_dm6.bed.gz	6.9 Mb	(ftp)(http)	BED
GSE256815_ENCFF605CIF_fold_change_over_control_dm6.bigWig	332.1 Mb	(ftp)(http)	BIGWIG
GSE256815_ENCFF782KBV_IDR_thresholded_peaks_dm6.bed.gz	35.3 Kb	(ftp)(http)	BED
GSE256815_ENCFF851GJH_IDR_ranked_peaks_dm6.bed.gz	6.4 Mb	(ftp)(http)	BED
GSE256815_ENCFF891GVS_IDR_thresholded_peaks_dm6.bed.gz	76.9 Kb	(ftp)(http)	BED
GSE256815_ENCFF898HBS_IDR_thresholded_peaks_dm6.bed.gz	36.8 Kb	(ftp)(http)	BED
GSE256815_ENCFF916FXI_IDR_ranked_peaks_dm6.bed.gz	6.3 Mb	(ftp)(http)	BED
GSE256815_RAW.tar	1.3 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA