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Series GSE256815

Query DataSets for GSE256815

Status

Public on Feb 27, 2024

Title

TF ChIP-seq from whole organism (ENCSR304JBT)

Project

modENCODE

Organism

Drosophila melanogaster

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

ChIP-seq on transgenic flies expressing lov-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR304JBT/

Citation(s)

22955616

BioProject

PRJNA63463

Submission date

Feb 24, 2024

Last update date

Feb 27, 2024

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL25244

Illumina NovaSeq 6000 (Drosophila melanogaster)

Samples (3)

GSM8106597	TF ChIP-seq from whole organism (ENCLB884CKK)
GSM8106598	TF ChIP-seq from whole organism (ENCLB229EGM)
GSM8106599	TF ChIP-seq from whole organism (ENCLB666ARH)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE256815_ENCFF153EKK_IDR_thresholded_peaks_dm6.bigBed	175.2 Kb	(ftp)(http)	BIGBED
GSE256815_ENCFF208RWW_signal_p-value_dm6.bigWig	297.0 Mb	(ftp)(http)	BIGWIG
GSE256815_ENCFF279CRM_conservative_IDR_thresholded_peaks_dm6.bigBed	138.8 Kb	(ftp)(http)	BIGBED
GSE256815_ENCFF328SXT_IDR_thresholded_peaks_dm6.bigBed	116.5 Kb	(ftp)(http)	BIGBED
GSE256815_ENCFF366BED_IDR_thresholded_peaks_dm6.bigBed	119.1 Kb	(ftp)(http)	BIGBED
GSE256815_ENCFF452ISW_conservative_IDR_thresholded_peaks_dm6.bed.gz	50.9 Kb	(ftp)(http)	BED
GSE256815_ENCFF532CVP_IDR_ranked_peaks_dm6.bed.gz	6.0 Mb	(ftp)(http)	BED
GSE256815_ENCFF536JOP_IDR_ranked_peaks_dm6.bed.gz	6.9 Mb	(ftp)(http)	BED
GSE256815_ENCFF605CIF_fold_change_over_control_dm6.bigWig	332.1 Mb	(ftp)(http)	BIGWIG
GSE256815_ENCFF782KBV_IDR_thresholded_peaks_dm6.bed.gz	35.3 Kb	(ftp)(http)	BED
GSE256815_ENCFF851GJH_IDR_ranked_peaks_dm6.bed.gz	6.4 Mb	(ftp)(http)	BED
GSE256815_ENCFF891GVS_IDR_thresholded_peaks_dm6.bed.gz	76.9 Kb	(ftp)(http)	BED
GSE256815_ENCFF898HBS_IDR_thresholded_peaks_dm6.bed.gz	36.8 Kb	(ftp)(http)	BED
GSE256815_ENCFF916FXI_IDR_ranked_peaks_dm6.bed.gz	6.3 Mb	(ftp)(http)	BED
GSE256815_RAW.tar	1.3 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA