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Series GSE255772 Query DataSets for GSE255772
Status Public on May 13, 2024
Title IL-8+ neutrophils drive inexorable inflammation in severe alcohol-associated hepatitis [scRNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Patients with alcohol-associated liver cirrhosis (AC) may develop severe alcohol-associated hepatitis (sAH), but the mechanisms underlying the transition from AC to sAH still remain unclear. We performed single cell RNA (scRNA) sequencing analysis of livers and peripheral white blood cells (WBC) from sAH and AC patients. We found that the significant difference between sAH and AC was that sAH livers had a markedly higher number of neutrophil subsets than AC livers. Thus, we further focused on the neutrophil cluster and found two distinct sAH-specific liver neutrophils are notably characterized by heightened expression of CXCL8 (IL-8) defined as IL-8+ neutrophils blood. Our current study has demonstrated that sAH had self-sustaining IL-8+ neutrophil accumulation that likely drives inexorable liver inflammation and failure in sAH. Based on our study, we believe targeting IL-8+ neutrophils is a promising therapeutic strategy for sAH.
 
Overall design We performed scRNA sequencing analysis of 6 liver tissues and 7 peripheral white blood cells (WBC) from sAH and AC patients, including 5 sAH livers, 4 sAH WBCs; 1 AC liver, and 3 AC WBCs.
Web link https://doi.org/10.1172/JCI178616
 
Contributor(s) GUAN Y, Peiffer B, Feng D, Sun Z, GAO B
Citation(s) 38502218
Submission date Feb 14, 2024
Last update date May 14, 2024
Contact name Yukun Guan
E-mail(s) yukun.guan@nih.gov
Organization name NIAAA
Lab LLD
Street address 5625 Fishers Lane, Room 2S-30
City Rockville
State/province MD
ZIP/Postal code 20852
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (13)
GSM8079816 Liver_AC29
GSM8079817 Liver_sAH100
GSM8079818 Liver_sAH101
Relations
BioProject PRJNA1076500

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Supplementary file Size Download File type/resource
GSE255772_RAW.tar 236.9 Mb (http)(custom) TAR (of H5)
SRA Run SelectorHelp
Raw data are available in SRA

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