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Series GSE254810 Query DataSets for GSE254810
Status Public on May 26, 2024
Title Ultrasound-responsive theranostic platform for real-time monitoring and efficient thrombolysis in tPA-resistant thrombi
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary There is no noninvasive solution for tPA-resistant thrombi while endovascular thrombectomy is the last option. Here, we proposed neutrophil extracellular traps (NETs), ε-(γ-glutamyl)lysine isopeptide bonds and fibrin scaffold as keychain in tPA-resistant thrombus, which was confirmed in the thrombi retrieved from stroke patients. A theranostic platform was designed for the combination of sonodynamic and mechanical thrombolysis under the guidance of ultrasonic imaging. Three rounds of 10 min noninvasive treatment led to the breakdown of the keychain, achieving great recanalization rate of 90% in rat occlusion model while tPA only made 10% improvement. RNA sequencing results and endothelium functional tests jointly indicated that the vascular homeostasis can be effectively reconstructed. The noninvasive theranostic capability presented in pig’s lengthy thrombi (>8mm) and thrombosis-susceptible tissue engineered vascular grafts (TEVGs) indicated its clinical transformation prospects. Taken together, this non-invasive theranostic platform provides a new strategy for tPA-resistant thrombi.
 
Overall design Rat common carotid artery thrombosis was induced by ferric chloride, vascular recanalization was achieved under the combination of sonodynamic therapy and physical-explosion therapy, and the recanalized common carotid arteries were collected after one day and one week. Normal rat common carotid artery was taken as control.
 
Contributor(s) Zeng W, Lin L
Citation(s) 39098904
Submission date Feb 01, 2024
Last update date Sep 03, 2024
Contact name Wen Zeng
Organization name Army Medical University
Department Department of Cell Biology
Lab zwlab
Street address Gaotanyan street
City Chongqing
ZIP/Postal code 400037
Country China
 
Platforms (1)
GPL25947 Illumina NovaSeq 6000 (Rattus norvegicus)
Samples (6)
GSM8058084 Control
GSM8058085 Recanalized_D1_rep1
GSM8058086 Recanalized_D1_rep2
Relations
BioProject PRJNA1071989

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE254810_fpkm.xlsx 2.0 Mb (ftp)(http) XLSX
GSE254810_readcount.xlsx 1.1 Mb (ftp)(http) XLSX
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Raw data are available in SRA

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