NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE252984 Query DataSets for GSE252984
Status Public on Jun 18, 2024
Title TFAM deficiency promotes mitochondrial dysfunction to drive inflammation in the corneas of dry eye disease through mtDNA stress-mediated AIM2 inflammasome activation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Background & Aims Mitochondrial dysfunction and mtDNA stress-mediated inflammasome activation play critical roles in the pathogenesis of dry eye disease (DED). Mitochondrial transcription factor A (TFAM) is essential for regulating mtDNA stability and mitochondrial homeostasis. However, the mechanism underling TFAM to infuence DED progression is largely unknown. As a cytosolic DNA sensor, absent in melanoma 2 (AIM2) may contribute to the development of DED. Therefore, we aimed to explore whether the role of TFAM is associated with AIM2 inflammasome activation in DED. Methods The changes in inflammation, mitochondrial function, mtDNA homeostasis and TFAM expression were analyzed in the corneas of DED mice in vivo and in HCECs under oxidative stress in vitro. The effects of TFAM knockout on mtDNA homeostasis, mitochondrial respiration and cytokine release were also investigated in HCECs. The mechanism was analyzed by RNA sequencing in the corneas of DED mice, which was further verified by the HCECs with TFAM depletion. Results We found that the corneas of DED mice and HCECs under oxidative stress exhibited inflammation, mitochondrial damage and mtDNA maintenance disruption , which were highly associated with significantly reduced TFAM protein levels. Furthermore, we demonstrated that silencing of TFAM in HCECs suppressed mitochondrial respiratory capacity, induced mtDNA released into the cytosol and triggered cytokine release. Mechanistically, cytosolic mtDNA accumulation caused by TFAM depletion activated the AIM2 inflammasome and facilitated inflammation, thereby driving DED progression. Conclusions Our findings elucidate that TFAM deficiency induces mitochondrial dysfunction and cytosolic mtDNA stress, which subsequently activates the AIM2 inflammasome, triggers inflammatory responses and promotes DED progression. TFAM pathway may provide a novel therapeutic strategy for DED.
 
Overall design The global gene expression of cornea in dry eye disease mice and control mice was analyzed and compared (n=4).
Web link https://pubmed.ncbi.nlm.nih.gov/38797339/
 
Contributor(s) Li Y, Jie Y
Citation(s) 38797339
Submission date Jan 10, 2024
Last update date Sep 17, 2024
Contact name yaqiong li
E-mail(s) liyaqiong@mail.ccmu.edu.cn
Organization name Capital Medical University
Street address youanmenwai
City Beijing
ZIP/Postal code 100069
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM8011861 Cornea, BAC, 7day,rep1
GSM8011862 Cornea, BAC, 7day,rep2
GSM8011863 Cornea, BAC, 7day,rep3
Relations
BioProject PRJNA1063432

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE252984_All_Differentially_Expressed_Genes.xlsx 2.8 Mb (ftp)(http) XLSX
GSE252984_All_Differentially_Expressed_Transcripts.xlsx 4.6 Mb (ftp)(http) XLSX
GSE252984_Differentially_Expressed_Genes.xlsx 1.1 Mb (ftp)(http) XLSX
GSE252984_Differentially_Expressed_Transcripts.xlsx 1.4 Mb (ftp)(http) XLSX
GSE252984_Expression_Gene.xlsx 1.8 Mb (ftp)(http) XLSX
GSE252984_Expression_Transcript.xlsx 2.9 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap