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Series GSE251890 Query DataSets for GSE251890
Status Public on Mar 14, 2024
Title Dual-inhibition of NAMPT and PAK4 induces anti-tumor effects in platinum-resistant ovarian cancer by suppressing mitochondrial function and expression of genes related to inflammation and DNA repair.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Ovarian cancer follows a characteristic progression pattern, forming multiple tumor masses enriched with cancer stem cells (CSCs) within the abdomen. Most patients become resistant to standard platinum-based drugs, necessitating a change in treatment approach. To target CSCs, inhibiting NAMPT, which is the rate-limiting enzyme in the salvage pathway for NAD+ synthesis, has been explored. KPT-9274 is an innovative drug targeting both NAMPT and PAK4. However, its effectiveness against ovarian cancer had not been validated. Here, we show the efficacy and mechanisms of KPT-9274 in treating 3D-cultured spheroids that are resistant to platinum-based drugs. In these spheroids, KPT-9274 not only inhibited NAD+ production in NAMPT-dependent cell lines, but also suppressed NADPH and ATP production, indicating reduced mitochondrial function. It also downregulated expression of inflammation and gene repair-related genes. Moreover, by altering PAK4's mostly cytoplasmic localization, the compound hindered kinase activity, leading to decreased phosphorylation of S6 Ribosomal protein, AKT, and β-Catenin in the cytoplasm and its suppression was NAD+- dependent. These findings suggest that KPT-9274 could be a promising treatment for ovarian cancer patients resistant to platinum drugs, emphasizing the need for precision medicine to identify the specific NAD+-producing pathway a tumor relies on before treatment.
 
Overall design Total RNA obtained from ovarian cancer cell line with KPT-9274 treatment (24 hours) compared to untreated control cells.
 
Contributor(s) Kudo K, Greer YE, Yoshida T, Harrington BS, Korrapati S, Shibuya Y, Henegar L, Kopp JB, Fujii T, Lipkowitz S, Annunziata CM
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Submission date Dec 22, 2023
Last update date Mar 14, 2024
Contact name Kei Kudo
E-mail(s) kei.kudo@nih.gov
Phone 3014763986
Organization name NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (8)
GSM7989553 Kudo3D_1
GSM7989554 Kudo3D_2
GSM7989555 Kudo3D_3
Relations
BioProject PRJNA1055882

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Supplementary file Size Download File type/resource
GSE251890_RSEM_count.tar.gz 55.8 Mb (ftp)(http) TAR
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