 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jul 02, 2011 |
| Title |
Transcriptome analysis of rice infected with three RDV strains |
| Platform organism |
Oryza sativa |
| Sample organism |
Oryza sativa Japonica Group |
| Experiment type |
Expression profiling by array
|
| Summary |
Rice dwarf virus (RDV) is the causal agent of rice dwarf disease which causes severe loss of rice yield in northern Asia countries. The disease symptoms are stunting of plant growth, chlorosis specks on leaves, and delayed and incomplete panicle exertion. Symptom severity was different among three strains (RDV-O, –D84, and -S), and was in the rank order RDV-O < -D84, < -S. In this study, we have analyzed the relationship between symptom severity and host gene responses by the gene expression analysis through the 60-mer oligo microarray.
Keywords: virus infection, disease response
|
| |
|
| Overall design |
Comparison between RDV and mock infected rice. Biological replicates: 3 control, 3 infected, independently grown and harvested., 3 strain (RDV-O, -D84, -S). 1 samples derived from 5 plants grown under same conditons
|
| |
|
| Contributor(s) |
Shimizu T, Sasaya T, Kondoh H, Satoh H, Kimura S, Omura T, Kikuchi S |
| Citation(s) |
21445363, 26442000 |
| |
| Submission date |
Oct 26, 2010 |
| Last update date |
Oct 07, 2015 |
| Contact name |
Kouji Satoh |
| Organization name |
NARO/HARC
|
| Street address |
Hitsujigaoka 1
|
| City |
Sapporo |
| State/province |
Hokkaido |
| ZIP/Postal code |
062-8555 |
| Country |
Japan |
| |
|
| Platforms (1) |
|
| Samples (9)
|
|
| Relations |
| BioProject |
PRJNA131933 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE24937_RAW.tar |
106.6 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
|
|
|
|
 |
Less...
More...