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GEO accession:
Series GSE247935
Query DataSets for GSE247935
Status
Public on Feb 07, 2024
Title
Slam-seq reveals that miR-430 regulates zygotic mRNA during zebrafish embryogenesis
Organism
Danio rerio
Experiment type
Expression profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Web link
https://doi.org/10.1186/s13059-024-03197-8
Citation(s)
38504288
Submission date
Nov 15, 2023
Last update date
May 17, 2024
Contact name
Ariel Alejandro Bazzini
Organization name
Stowers Institute for Medical Research
Lab
Bazzini Lab
Street address
1000 E 50th St
City
Kansas City
State/province
Missouri
ZIP/Postal code
64110
Country
USA
Platforms (2)
GPL20828
Illumina NextSeq 500 (Danio rerio)
GPL30614
NextSeq 2000 (Danio rerio)
Samples (49)
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GSM7903215
zebrafish_shield_20µM_lnacontrol_50mM_s4u_r1
GSM7903216
zebrafish_shield_20µM_lnacontrol_50mM_s4u_r2
GSM7903217
zebrafish_shield_20µM_lnacontrol_50mM_s4u_r3
GSM7903218
zebrafish_shield_20µM_lnacontrol_50mM_s4u_r4
GSM7903219
zebrafish_shield_20µM_lnacontrol_50mM_s4u_r5
GSM7903220
zebrafish_shield_20µM_lnacontrol_50mM_s4u_r6
GSM7903221
zebrafish_shield_20µM_lnamir430_50mM_s4u_r1
GSM7903222
zebrafish_shield_20µM_lnamir430_50mM_s4u_r2
GSM7903223
zebrafish_shield_20µM_lnamir430_50mM_s4u_r3
GSM7903224
zebrafish_shield_20µM_lnamir430_50mM_s4u_r4
GSM7903225
zebrafish_shield_20µM_lnamir430_50mM_s4u_r5
GSM7903226
zebrafish_shield_20µM_lnamir430_50mM_s4u_r6
GSM7903253
zebrafish_1hour_wt_75mM_s4u_r1
GSM7903254
zebrafish_1hour_wt_75mM_s4u_r2
GSM7903255
zebrafish_1hour_wt_75mM_s4u_r3
GSM7903256
zebrafish_2hour_wt_75mM_s4u_r1
GSM7903257
zebrafish_2hour_wt_75mM_s4u_r2
GSM7903258
zebrafish_3hour_wt_75mM_s4u_r1
GSM7903259
zebrafish_3hour_wt_75mM_s4u_r2
GSM7903260
zebrafish_3hour_wt_75mM_s4u_r3
GSM7903261
zebrafish_4hour_wt_75mM_s4u_r1
GSM7903262
zebrafish_4hour_wt_75mM_s4u_r2
GSM7903263
zebrafish_4hour_wt_75mM_s4u_r3
GSM7903264
zebrafish_5hour_wt_75mM_s4u_r1
GSM7903265
zebrafish_5hour_wt_75mM_s4u_r2
GSM7903266
zebrafish_5hour_wt_75mM_s4u_r3
GSM7903267
zebrafish_6hour_wt_75mM_s4u_r2
GSM7903268
zebrafish_6hour_wt_75mM_s4u_r3
GSM7903269
zebrafish_7hour_wt_75mM_s4u_r1
GSM7903270
zebrafish_7hour_wt_75mM_s4u_r2
GSM7903271
zebrafish_7hour_wt_75mM_s4u_r3
GSM7903272
zebrafish_8hour_wt_75mM_s4u_r1
GSM7903273
zebrafish_8hour_wt_75mM_s4u_r2
GSM7903274
zebrafish_8hour_wt_75mM_s4u_r3
GSM7903275
zebrafish_7hours_wt_non_injected_r1
GSM7903276
zebrafish_7hours_wt_non_injected_r2
GSM7903277
zebrafish_7hours_wt_non_injected_r3
GSM7903278
zebrafish_7hours_wt_25mM_s4u_r1
GSM7903279
zebrafish_7hours_wt_25mM_s4u_r2
GSM7903280
zebrafish_7hours_wt_25mM_s4u_r3
GSM7903281
zebrafish_7hours_wt_50mM_s4u_r1
GSM7903282
zebrafish_7hours_wt_50mM_s4u_r2
GSM7903283
zebrafish_7hours_wt_50mM_s4u_r3
GSM7903284
zebrafish_7hours_wt_75mM_s4u_r1
GSM7903285
zebrafish_7hours_wt_75mM_s4u_r2
GSM7903286
zebrafish_7hours_wt_75mM_s4u_r3
GSM7903287
zebrafish_7hours_aamanitin_75mM_s4u_r1
GSM7903288
zebrafish_7hours_aamanitin_75mM_s4u_r2
GSM7903289
zebrafish_7hours_aamanitin_75mM_s4u_r3
This SuperSeries is composed of the following SubSeries:
GSE247930
Slam-seq reveals that miR-430 regulates zygotic mRNA during zebrafish embryogenesis [lna_data]
GSE247933
Slam-seq reveals that miR-430 regulates zygotic mRNA during zebrafish embryogenesis [timecourse_data]
GSE247934
Slam-seq reveals that miR-430 regulates zygotic mRNA during zebrafish embryogenesis [titration_data]
Relations
BioProject
PRJNA1040928
Download family
Format
SOFT formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE247935_RAW.tar
36.0 Mb
(http)
(custom)
TAR (of CSV)
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