 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jul 17, 2024 |
| Title |
miRNAs regulated systemically by nitrogen availability in shoots and roots of Medicago truncatula |
| Organism |
Medicago truncatula |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
Using a dedicated split-root approach, we identified miRNAs regulated systemically by nitrogen availability in both shoots and roots of the Medicago truncatula model legume, depending on the CRA2 pathway, highlighting the phosphate-related miR399.
|
| |
|
| Overall design |
small RNA-seq of distant split-root or shoots of medicago truncatulla control (A17) or cra2 mutant where local split-roots were subjected to nitrogen satiety or deficitconducted in triplicate.
|
| |
|
| Contributor(s) |
Marjorie P, Marc L, Hugues P, Thomas B, Florian F |
| Citation(s) |
38941269 |
| |
| Submission date |
Nov 09, 2023 |
| Last update date |
Oct 16, 2024 |
| Contact name |
Thomas Blein |
| E-mail(s) |
thomas.blein@cnrs.fr
|
| Organization name |
CNRS
|
| Lab |
IPS2
|
| Street address |
Avenue des Sciences
|
| City |
Gif-sur-Yvette |
| ZIP/Postal code |
91190 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL30272 |
Illumina NovaSeq 6000 (Medicago truncatula) |
|
| Samples (24)
|
| GSM7889080 |
A17, root, satiety, rep1 |
| GSM7889081 |
A17, root, satiety, rep2 |
| GSM7889082 |
A17, root, satiety, rep3 |
| GSM7889083 |
A17, shoot, deficit, rep1 |
| GSM7889084 |
A17, shoot, deficit, rep2 |
| GSM7889085 |
A17, shoot, deficit, rep3 |
| GSM7889086 |
A17, shoot, satiety, rep1 |
| GSM7889087 |
A17, shoot, satiety, rep2 |
| GSM7889088 |
A17, shoot, satiety, rep3 |
| GSM7889089 |
cra2, root, deficit, rep1 |
| GSM7889090 |
cra2, root, deficit, rep2 |
| GSM7889091 |
cra2, root, deficit, rep3 |
| GSM7889092 |
cra2, root, satiety, rep1 |
| GSM7889093 |
cra2, root, satiety, rep2 |
| GSM7889094 |
cra2, root, satiety, rep3 |
| GSM7889095 |
cra2, shoot, deficit, rep1 |
| GSM7889096 |
cra2, shoot, deficit, rep2 |
| GSM7889097 |
cra2, shoot, deficit, rep3 |
| GSM7889098 |
cra2, shoot, satiety, rep1 |
| GSM7889099 |
cra2, shoot, satiety, rep2 |
| GSM7889100 |
cra2, shoot, satiety, rep3 |
|
| Relations |
| BioProject |
PRJNA1037502 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE247405_RAW.tar |
110.0 Kb |
(http)(custom) |
TAR (of TSV) |
SRA Run Selector |
| Raw data are available in SRA |
|
|
|
|
 |
Less...
More...