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GEO accession:
Series GSE247119
Query DataSets for GSE247119
Status
Public on Nov 07, 2023
Title
Two-motif model illuminates DICER cleavage preferences
Organisms
Homo sapiens
;
synthetic RNA
Experiment type
Expression profiling by high throughput sequencing
Other
Non-coding RNA profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Web link
https://doi.org/10.1093/nar/gkad1186
Citation(s)
38167721
Submission date
Nov 06, 2023
Last update date
Mar 07, 2024
Contact name
Truc Cong LE
Organization name
The Hong Kong University of Science and Technology
Department
Life Science
Lab
RIPE lab
Street address
Clearwater Bay, Kowloon
City
Hong Kong SAR
ZIP/Postal code
999077
Country
Hong Kong
Platforms (2)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
GPL33226
Illumina NovaSeq 6000 (synthetic RNA)
Samples (37)
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More...
GSM7086218
Control sample 1
GSM7086219
Control sample 2
GSM7086220
Control sample 3
GSM7086221
Dicer-WT double cleavage replicate 1
GSM7086222
Dicer-WT double cleavage replicate 2
GSM7086223
Dicer-WT double cleavage replicate 3
GSM7086224
Dicer-WT single cleavage replicate 1
GSM7086225
Dicer-WT single cleavage replicate 2
GSM7086226
Dicer-WT single cleavage replicate 3
GSM7086227
Dicer-dsRBD-deletion double cleavage replicate 1
GSM7086228
Dicer-dsRBD-deletion double cleavage replicate 2
GSM7086229
Dicer-dsRBD-deletion double cleavage replicate 3
GSM7086230
Dicer-dsRBD-deletion single cleavage replicate 1
GSM7086231
Dicer-dsRBD-deletion single cleavage replicate 2
GSM7086232
Dicer-dsRBD-deletion single cleavage replicate 3
GSM7883523
Control sample replicate 1
GSM7883524
Control sample replicate 2
GSM7883525
Dicer-R1855A double cleavage replicate 1
GSM7883526
Dicer-R1855A double cleavage replicate 2
GSM7883527
Dicer-R1855A single cleavage replicate 1
GSM7883528
Dicer-R1855A single cleavage replicate 2
GSM7883529
Dicer-E1859A double cleavage replicate 1
GSM7883530
Dicer-E1859A double cleavage replicate 2
GSM7883531
Dicer-E1859A single cleavage replicate 1
GSM7883532
Dicer-E1859A single cleavage replicate 2
GSM7883533
DICER-WT rescue replicate 1
GSM7883534
DICER-WT rescue replicate 2
GSM7883535
DICER-WT rescue replicate 3
GSM7883536
DICER-deldsRBD rescue replicate 1
GSM7883537
DICER-deldsRBD rescue replicate 2
GSM7883538
DICER-deldsRBD rescue replicate 3
GSM7883539
DICER-R1855A rescue replicate 1
GSM7883540
DICER-R1855A rescue replicate 2
GSM7883541
DICER-R1855A rescue replicate 3
GSM7883542
DICER-E1859A rescue replicate 1
GSM7883543
DICER-E1859A rescue replicate 2
GSM7883544
DICER-E1859A rescue replicate 3
This SuperSeries is composed of the following SubSeries:
GSE226874
Two-motif model illuminates DICER's cleavage preferences [DICER]
GSE247113
Two-motif model illuminates DICER's cleavage preferences [DICER-mutants]
GSE247114
Two-motif model illuminates DICER's cleavage preferences [DICER-rescue]
Relations
BioProject
PRJNA1036236
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE247119_RAW.tar
230.0 Kb
(http)
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