|
| Status |
Public on Aug 19, 2024 |
| Title |
Utility analyses of AVITI sequencing platforms |
| Organisms |
Homo sapiens; synthetic construct |
| Experiment type |
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
39127634 |
| |
| Submission date |
Nov 02, 2023 |
| Last update date |
Aug 20, 2024 |
| Contact name |
Shuchang Liu |
| E-mail(s) |
shl96@pitt.edu
|
| Organization name |
University of Pittsburgh
|
| Street address |
203 Lothrop Street
|
| City |
Pittsburgh |
| State/province |
PA |
| ZIP/Postal code |
15261 |
| Country |
USA |
| |
|
| Platforms (5)
|
| GPL23525 |
Complete Genomics (Homo sapiens) |
| GPL26526 |
Illumina NovaSeq 6000 (synthetic construct) |
| GPL27609 |
NextSeq 550 (synthetic construct) |
| GPL33907 |
Complete Genomics (synthetic construct) |
| GPL34589 |
Element AVITI (synthetic construct) |
|
| Samples (27)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE246830 |
Set1: ERCC bulk short-read RNA-seq by Element Biosciences AVITI platform |
| GSE246832 |
Set2: ERCC bulk short-read RNA-seq by Illumina NextSeq platform |
| GSE246834 |
Set3: ERCC bulk Loop-seq long-read RNA-seq by Element Biosciences AVITI platform |
| GSE246835 |
Set4: ERCC bulk Loop-seq long-read RNA-seq by Illumina NovaSeq platform |
| GSE246836 |
Set5: HCC single-cell Loop-seq long-read RNA-seq by Element Biosciences AVITI platform |
| GSE269800 |
Set6: ERCC bulk short-read RNA-seq by Element Biosciences AVITI platform, additional samples |
| GSE269801 |
Set7: ERCC bulk short-read RNA-seq by Illumina NextSeq platform, additional samples |
|
| Relations |
| BioProject |
PRJNA1034957 |
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