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GEO accession:
Series GSE246678
Query DataSets for GSE246678
Status
Public on Nov 29, 2023
Title
Genome-wide mapping of a repressive H3K36me2 reader during growth mycelia in the Magnaporthe oryzae
Organism
Pyricularia oryzae
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Summary
A putative EAF3/MRG15 ortholog N1617, containing chromo and MRG domain, is a partner of Ash1 in Magnaporthe oryzae
Overall design
Examination of 2 different mutants in Magnaporthe oryzae strain
Contributor(s)
Tao Z
Citation(s)
39179589
Submission date
Oct 31, 2023
Last update date
Sep 27, 2024
Contact name
mengting xu
E-mail(s)
12116082@zju.edu.cn
Phone
19858122056
Organization name
mengtingxu
Street address
Zhejiang University
City
Hangzhou
State/province
ZheJiang
ZIP/Postal code
310058
Country
China
Platforms (1)
GPL32309
Illumina NovaSeq 6000 (Pyricularia oryzae)
Samples (43)
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GSM7874530
mycelia - H3K27me3_WT_rep1_IP
GSM7874531
mycelia - H3K27me3_WT_rep2_IP
GSM7874532
mycelia - H3K27me3_1617_rep1_IP
GSM7874533
mycelia - H3K27me3_1617_rep2_IP
GSM7874534
mycelia - H3K27ac_WT_rep1_IP
GSM7874535
mycelia - H3K27ac_WT_rep2_IP
GSM7874536
mycelia - H3K27ac_1617_rep1_IP
GSM7874537
mycelia - H3K27ac_1617_rep2_IP
GSM7874538
mycelia - H3K36me3_WT_rep1_IP
GSM7874539
mycelia - H3K36me3_WT_rep2_IP
GSM7874540
mycelia - H3K36me3_1617_rep1_IP
GSM7874541
mycelia - H3K36me3_1617_rep2_IP
GSM7874542
mycelia - H3K36me2_WT_rep1_IP
GSM7874543
mycelia - H3K36me2_WT_rep2_IP
GSM7874544
mycelia - H3K36me2_1617_rep1_IP
GSM7874545
mycelia - H3K36me2_1617_rep2_IP
GSM7874546
mycelia - H3K36me2_WTn_rep1_IP
GSM7874547
mycelia - H3K36me2_WTn_rep2_IP
GSM7874548
mycelia - H3K36me2_eed_rep1_IP
GSM7874549
mycelia - H3K36me2_eed_rep2_IP
GSM7874550
mycelia - H3K36me2_kmt6_rep1_IP
GSM7874551
mycelia - H3K36me2_kmt6_rep2_IP
GSM7874552
mycelia - N1617GFP_rep1_IP
GSM7874553
mycelia - N1617GFP_rep2_IP
GSM7874554
mycelia - N1617GFP_Input
GSM7874555
mycelia - N1617CD-GFP_rep1_IP
GSM7874556
mycelia - N1617CD-GFP_rep2_IP
GSM7874557
mycelia - N1617CD-GFP_Input
GSM7874558
mycelia - N1617MRG-GFP_rep1_IP
GSM7874559
mycelia - N1617MRG-GFP_rep2_IP
GSM7874560
mycelia - N1617MRG-GFP_Input
GSM7874561
mycelia -MNase_WT_rep1_IP
GSM7874562
mycelia -MNase_WT_rep2_IP
GSM7874563
mycelia -MNase_1617_rep1_IP
GSM7874564
mycelia -MNase_1617_rep2_IP
GSM8231912
mycelia - N1617GFP-ash1_rep1_IP
GSM8231913
mycelia - N1617GFP-ash1_rep2_IP
GSM8231914
mycelia - N1617GFP-ash1_rep3_IP
GSM8231915
mycelia - N1617GFP-ash1_Input
GSM8231916
mycelia - N1617GFP-eed_rep1_IP
GSM8231917
mycelia - N1617GFP-eed_rep2_IP
GSM8231918
mycelia - N1617GFP-eed_rep3_IP
GSM8231919
mycelia - N1617GFP-eed_Input
This SubSeries is part of SuperSeries:
GSE246679
Repressive H3K36me2 reader during growth mycelia in the Magnaporthe oryzae
Relations
BioProject
PRJNA1034121
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE246678_ChIP-seq_processed_data.tar.gz
1.1 Mb
(ftp)
(http)
TAR
GSE246678_MNase_processed_data.tar.gz
1.3 Mb
(ftp)
(http)
TAR
GSE246678_RAW.tar
6.3 Gb
(http)
(custom)
TAR (of BEDGRAPH, TXT)
SRA Run Selector
Raw data are available in SRA
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