|
| Status |
Public on Jan 30, 2024 |
| Title |
RNA-sequencing of PDX from small round cell sarcomas |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The goal of this study was to profile the transcriptome of different small round cell sarcomas from patient-derived xenografts. We derive unique gene expression associated with each of the fusion proteins driving these sarcomas.
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| |
|
| Overall design |
We obtained fresh-frozen tissue from the PDXs from small round cell sarcomas including Ewing sarcoma, CIC-DUX4 sarcoma and desmoplastic small round cell tumors. After removal, RNA was extracted and processed for RNA-sequencing.
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| |
|
| Contributor(s) |
Truong D, Ludwig J |
| Citation(s) |
37986851, 38575753 |
| |
| Submission date |
Oct 20, 2023 |
| Last update date |
Apr 17, 2024 |
| Contact name |
Danh Truong |
| E-mail(s) |
dtruong4@mdanderson.org
|
| Organization name |
MD Anderson Cancer Center
|
| Street address |
1515 Holcombe Blvd
|
| City |
Houston |
| ZIP/Postal code |
TX |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA1030376 |
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