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Series GSE244971 Query DataSets for GSE244971
Status Public on Jun 05, 2024
Title Transcriptome data of hematopoietic stem cells of mice under ionizing radiation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Analysis of hematopoietic stem cells (HSC, Lineage-Sca-1+c-Kit+Flt3–CD34–). In order to better experiment, we treated mice with total body irradiation and local irradiation respectively. Next, the HSC were purified from the bone marrow of 8 weeks WT mice (Ctrl), total body radiation mice (IR), irradiated legs of locally irradiated mice (L_IR) and the other leg which unirradiated of locally irradiated mice (Ab_IR). Results provide the injury effect of IR on HSC under different conditions.
 
Overall design We then performed gene expression profiling analysis using data obtained from RNA-seq of HSCs of mice at 3 days after IR.
 
Contributor(s) Chen X, Liao W, Wang J
Citation(s) 38802843
Submission date Oct 10, 2023
Last update date Jun 06, 2024
Contact name Xinliang Chen
E-mail(s) chenxinliang@tmmu.edu.cn
Phone 18323060623
Organization name Army Medical University
Street address Gaotanyan street 30
City Chongqing
ZIP/Postal code 400038
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (12)
GSM7832911 Ctrl_HSC_rep1
GSM7832912 Ctrl_HSC_rep2
GSM7832913 Ctrl_HSC_rep3
Relations
BioProject PRJNA1026541

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE244971_RAW.tar 1.9 Mb (http)(custom) TAR (of TXT)
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Raw data are available in SRA

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