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Series GSE243892 Query DataSets for GSE243892
Status Public on Nov 30, 2023
Title EGFR-activated cancer-associated myofibroblasts promote metastasis in pancreatic cancer
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38157863, 39058588
Submission date Sep 23, 2023
Last update date Sep 12, 2024
Contact name Giulia Biffi
E-mail(s) Giulia.Biffi@cruk.cam.ac.uk
Organization name University of Cambridge
Street address Cancer Research UK, Robinson Way
City CAMBRIDGE
State/province Cambridgeshire
ZIP/Postal code CB2 0RE
Country United Kingdom
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (87)
GSM6775060 PSC4_CM_T6_2
GSM6775061 PSC4_CM_T8_1
GSM6775062 PSC5_CM_T6_2
This SuperSeries is composed of the following SubSeries:
GSE219180 RNA-Seq comparison of pancreatic stellate cells (PSCs) cultured with control media, TGF-beta, pancreatic tumor organoid conditioned media or pancreatic tumor organoid conditioned media in the presence of ERBBi (neratinib)
GSE243828 RNA-seq comparison of CD90- myCAFs and CD90+ myCAFs flow-sorted from murine PDAC tumors derived from the orthotopic transplantation of PDAC KPC T-LOH organoids
GSE243838 RNA-Seq of flow-sorted Egfr WT or Egfr KO pancreatic stellate cells (PSCs) and flow-sorted pancreatic tumor organoids following co-culture.
Relations
BioProject PRJNA1020418

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE243892_RAW.tar 2.7 Gb (http)(custom) TAR (of MTX, SF, TSV, TXT)
SRA Run SelectorHelp

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