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Series GSE243130 Query DataSets for GSE243130
Status Public on Jul 01, 2024
Title METTL7B is an essential epigenetic regulator of lineage specification in glioblastoma [DNAme]
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Glioblastomas are the most common malignant brain tumours in adults; they are highly aggressive, heterogeneous and plastic. We have identified METTL7B as an essential regulator of lineage specification in glioblastoma, with impact on both tumour size and invasiveness in in vivo models. Single cell transcriptomic analysis of these tumours and of cerebral organoids derived from expanded potential stem cells overexpressing METTL7B identified a regulatory role for the gene in the neural stem cells to astrocyte differentiation trajectory. Mechanistically, METTL7B downregulates the expression of key neuronal differentiation players, including SALL2, via DNA methylation and post-translational modifications of histone marks.
 
Overall design DNA methylation analysis of GIC19 and iNSC19 upon silencing or overexpression of METTL7B respectively (n = 4 replicates per group).
 
Contributor(s) Marino S, Constantinou M, Nicholson J, Maniati E, Badodi S
Citation(s) 38848215
Submission date Sep 13, 2023
Last update date Jul 02, 2024
Contact name James Nicholson
E-mail(s) james.nicholson@qmul.ac.uk
Organization name Queen Mary University of London
Department Blizard Institute
Street address 4 Newark St
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (16)
GSM7779707 genomic DNA from G19 Scramble 1
GSM7779708 genomic DNA from G19 Scramble 2
GSM7779709 genomic DNA from G19 Scramble 3
This SubSeries is part of SuperSeries:
GSE243132 METTL7B is an essential epigenetic regulator of lineage specification in glioblastoma
Relations
BioProject PRJNA1016410

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE243130_GEO_MatrixProcessed_G19.txt.gz 66.4 Mb (ftp)(http) TXT
GSE243130_GEO_MatrixProcessed_N19.txt.gz 64.8 Mb (ftp)(http) TXT
GSE243130_GEO_SignalIntensities_G19.txt.gz 42.5 Mb (ftp)(http) TXT
GSE243130_GEO_SignalIntensities_N19.txt.gz 40.8 Mb (ftp)(http) TXT
GSE243130_RAW.tar 381.1 Mb (http)(custom) TAR (of IDAT)

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