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Series GSE242488 Query DataSets for GSE242488
Status Public on Sep 22, 2023
Title Transcriptional regulation of human dorsal root ganglia cultures by type 2 cytokines
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Cutaneous afferent neurons express receptors for type 2 cytokines, including interleukins (IL)-4, IL-13, and IL-33. These neuronal cytokine receptors were found to be required in several murine models of itch. The objective of the present study was to determine if type 2 cytokine stimulation sensitizes sensory neurons to future itch stimuli in a fully human ex vivo system. Human dorsal root ganglia were isolated and dissociated to establish ex vivo cultures and subjected to 24 hours of type 2 cytokine exposure with either vehicle, IL-4, IL-13, IL-33, or IL-4 and IL-13 together. After 24 hours, cells were harvested and RNA extracted and sequenced to determine the transcriptomic effects of type 2 cytokine exposure.
 
Overall design Cultures were stimulated with 500 nM IL-4, IL-13, IL-33 or the combination of IL-4 and IL-13 for 24 hours. Vehicle alone and a cocktail of inflammatory mediators "CIS" were as negative and positive controls.
Web link http://doi: 10.3389/fnmol.2023.1258823
 
Contributor(s) Mack MR
Citation(s) 37868811
BioProject PRJNA1008658
Submission date Sep 06, 2023
Last update date Oct 26, 2023
Contact name Madison R Mack
Organization name Sanofi
Department Immunology & Inflammation Research
Street address 350 Water St
City Cambridge
State/province Massachusetts
ZIP/Postal code 02141
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (16)
GSM7764520 Vehicle treatment - Donor 11
GSM7764521 Vehicle treatment - Donor 12
GSM7764522 Vehicle treatment - Donor 13

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE242488_gene_count.txt.gz 2.6 Mb (ftp)(http) TXT
GSE242488_gene_fpkm.txt.gz 4.9 Mb (ftp)(http) TXT
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