NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE242359 Query DataSets for GSE242359
Status Public on Sep 12, 2023
Title Potential role of Bcl2 in lipid metabolism and synaptic dysfunction of age-related hearing loss
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Age-related hearing loss (ARHL) is a prevalent disease that affects millions of people worldwide. BCL-2 gene plays a tremendous role in cellular senescence, and it was confirmed that the BCL-2 family is closely associated with neurological disorders and ARHL. In addition to modulating apoptosis and oxidative stress, as well as other effects, this study we report here that BCL-2 plays a crucial position in regulating phospholipid and lipid metabolism in the developing cochlear tissues of rats and a sensory epithelial cell line(OC1), including the cholesterol synthesis pathway that is differentially expressed by genes such as LSS,NSDHL, and CYP51, which further demonstrates the mechanism of the action of BCL-2 in hair cells. In conclusion our data provide a new molecular framework for the regulatory mechanism of BCL-2 down-regulation in senescent cells. These findings provide valuable insights into the molecular mechanisms of ARHL and may set the stage for new therapeutic approaches for this prevalent age-related disease.
 
Overall design To investigate the potential mechanism of BCL-2 action in ARHL, we established OC1 cells with knocked down BCL-2 targeting sequences by siRNA. We performed gene expression profiling using RNA-seq data obtained from cells that knocked down the target gene in different targeting sequences. A comparison of the gene expression profiling analysis of RNA-seq data from OC1 cells was performed.
 
Contributor(s) Fan C, Liu Y, Zhang H
Citation(s) 37813166
Submission date Sep 05, 2023
Last update date Dec 21, 2023
Contact name Yue Liu
E-mail(s) A1785206@126.com
Organization name Longgang E.N.T Hospital & Shenzhen Key Laboratory of E.N.T, Institute of E.N.T
Street address No. 3004, Longgang Section, Longgang Avenue, Longgang District
City Shenzhen
ZIP/Postal code 518172
Country China
 
Platforms (1)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (12)
GSM7761515 A-1423 L1 129A29
GSM7761516 A-1928 L1 130A30
GSM7761517 A-NC L1 131A31
Relations
BioProject PRJNA1013359

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE242359_DEseq_norm.RData.gz 690.2 Kb (ftp)(http) RDATA
GSE242359_gene_count.csv.gz 652.9 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap