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Series GSE242217 Query DataSets for GSE242217
Status Public on Sep 04, 2023
Title Tumorigenic effects of human mesenchymal stromal cells and fibroblasts on bladder cancer cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We sought for deeper understanding of interaction mechanisms between tumor microenvironment cells, like fibroblast (FB) and mesenchymal stem cells (MSC), and bladder cancer cells to develop new cancer treatment approaches overcoming therapy resistance. To this end the bladder cancer cell lines BFTC-905 and VMCUB-1 were treated with conditioned media from FB or MSC for 72h. RNA was submitted to RNA sequencing analysis on the HiSeq 3000/4000 system (Illumina).
 
Overall design total RNA from urothelial carcinoma (UC) cell lines BFTC-905 and VMCUB-1 treated with conditioned media from fibroblasts (FB) or mesenchymal stem cells (MSC) for 72h compared to DMEM treated controls. Triplicates were analysed for each condition.
Web link https://www.frontiersin.org/journals/oncology/articles/10.3389/fonc.2023.1228185/full
 
Contributor(s) Frerichs LM, Frerichs B, Petzsch P, Köhrer K, Windolf J, Bittersohl B, Hoffmann MJ, Grotheer V
Citation(s) 37781195
Submission date Sep 01, 2023
Last update date Dec 13, 2023
Contact name Michèle J Hoffmann
E-mail(s) michele.hoffmann@hhu.de
Organization name Heinrich Heine University, Medical Faculty
Department Urology
Lab Bladder Cancer Lab
Street address Moorenstr. 5
City Duesseldorf
State/province NRW
ZIP/Postal code 40225
Country Germany
 
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (18)
GSM7755797 BFTC_DMEM_1
GSM7755798 BFTC_DMEM_2
GSM7755799 BFTC_DMEM_3
Relations
BioProject PRJNA1012003

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE242217_Experiment_processed_data.xlsx 8.5 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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