NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE242119 Query DataSets for GSE242119
Status Public on Sep 11, 2024
Title Acyl-coA Binding Protein neutralization improves cancer immunosurveillance
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary The plasma concentrations of acyl coenzyme A binding protein (ACBP, also known as diazepam-binding inhibitor, DBI, or ‘endozepine’) increase with age and obesity, two parameters that are also the most important risk factors for cancer. In mice bearing MCA205 fibrosarcoma, antibody mediated ACBP/DBI neutralization enhanced the anticancer T-cell response in the context of chemoimmunotherapy. T-cells infiltrating MCA205 tumors were sorted and submitting to single-cell TCR sequencing and single-cell RNA sequencing (scRNAseq) to identify the mechanisms driving this improvement.
 
Overall design C57Bl/6 mice were injected with 3E5 MCA205 cells subcutaneously. 8 days after injection they were treated intraperitoneally with one cycle of chemotherapy (10 mg/kg oxaliplatin) followed, 8 days later, by immunotherapy (200 µg anti-PD1). Simultaneously, half the mice were treated with anti-ACBP/DBI neutralizing antibody (n = 3), the other half with isotype control (n=3) (2.5 mg/kg every other day, from two days before chemotherapy to the day prior to immunotherapy). Tumors were collected two days after immunotherapy, dissociated and fluorescently labelled to sort CD4+ and CD8+ T cells. A CD4:CD8 ratio of 1:1 was analyzed by TCR/scRNAseq.
 
Contributor(s) Montégut L, Mena Osuna R, Martins I, Piaggio E, Kroemer G
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 31, 2023
Last update date Sep 12, 2024
Contact name Noémie Robil
E-mail(s) noemie.robil@genosplice.com
Organization name GenoSplice technology
Department Paris Biotech Santé
Street address 29, rue du Faubourg Saint-Jacques
City Paris
ZIP/Postal code 75014
Country France
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (12)
GSM7749226 Istoype_01
GSM7749227 Istoype_02
GSM7749228 Istoype_03
Relations
BioProject PRJNA1011354

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE242119_RAW.tar 296.0 Mb (http)(custom) TAR (of MTX, TSV)
GSE242119_filtered_contig_annotations.csv.gz 4.2 Mb (ftp)(http) CSV
GSE242119_metadata.csv.gz 1.6 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap