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Series GSE241952 Query DataSets for GSE241952
Status Public on Aug 31, 2024
Title Targeting LYPLAL1-mediated cGAS depalmitoylation enhances the response to anti-tumor immunotherapy
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Cyclic GMP-AMP synthase (cGAS) binds pathogenic and other cytoplasmic double-stranded DNA (dsDNA) to catalyze the synthesis of cyclic GMP-AMP (cGAMP), which serves as the secondary messenger to activate the STING pathway and innate immune responses. Emerging evidence suggests that activation of the cGAS pathway is crucial for anti-tumor immunity, however, no effective intervention method targeting cGAS is currently available. Here we report that cGAS is palmitoylated by ZDHHC9 at cysteines 404/405, which promotes the dimerization and activation of cGAS. We further identified that lysophospholipase-like 1 (LYPLAL1) depalmitoylates cGAS to compromise its normal function. As such, inhibition of LYPLAL1 significantly enhances cGAS-mediated innate immune response, elevates PD-L1 expression and enhances anti-tumor response to PD-1 blockade. Our results therefore reveal that targeting LYPLAL1-mediated cGAS depalmitoylation contributes to cGAS activation, providing a potential strategy to augment the efficacy of anti-tumor immunotherapy.
 
Overall design Comparative gene expression profiling analysis of RNA-seq data for 4T-1 wild-type cells and Lyplal1 knockout cells.
 
Contributor(s) Fan Y, Yang G, Wei W, Li L
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Submission date Aug 30, 2023
Last update date Aug 31, 2024
Contact name Yizeng Fan
E-mail(s) fyz19910701@xjtufh.edu.cn
Organization name Xi'an Jiaotong University
Street address Yanta West Road
City Xi'an
ZIP/Postal code 710061
Country China
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (6)
GSM7746361 4T-1 cells, wild-type, rep1
GSM7746362 4T-1 cells, wild-type, rep2
GSM7746363 4T-1 cells, wild-type, rep3
Relations
BioProject PRJNA1010803

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE241952_Mus_TPM_raw.txt.gz 906.4 Kb (ftp)(http) TXT
GSE241952_RAW.tar 3.0 Mb (http)(custom) TAR (of TXT)
GSE241952_allsample_featureCounts.txt.gz 413.1 Kb (ftp)(http) TXT
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Raw data are available in SRA

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