|
| Status |
Public on Aug 26, 2023 |
| Title |
SUMOylation of Bonus, the Drosophila homolog of Transcription Intermediary Factor 1, safeguards germline identity by recruiting repressive chromatin complexes to silence tissue-specific genes. |
| Organism |
Drosophila melanogaster |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
37999956 |
| |
| Submission date |
Aug 21, 2023 |
| Last update date |
Dec 08, 2023 |
| Contact name |
Baira Godneeva |
| E-mail(s) |
bairagodneeva@gmail.com
|
| Organization name |
California Institute of Technology
|
| Department |
Division of Biology and Biological Engineering
|
| Street address |
1200 E California Blvd
|
| City |
Pasadena |
| State/province |
CA |
| ZIP/Postal code |
91125 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17275 |
Illumina HiSeq 2500 (Drosophila melanogaster) |
|
| Samples (18)
|
| GSM7727908 |
nos-Gal4 driven control KD input |
| GSM7727909 |
nos-Gal4 driven BonusKD input biological replicate 1 |
| GSM7727910 |
nos-Gal4 driven BonusKD input biological replicate 2 |
| GSM7727911 |
nos-Gal4 driven control KD H3K9me3-ChIP |
| GSM7727912 |
nos-Gal4 driven Bonus KD H3K9me3-ChIP biological replicate 1 |
| GSM7727913 |
nos-Gal4 driven Bonus KD H3K9me3-ChIP biological replicate 2 |
| GSM7727914 |
MT-Gal4 driven BonusKD RNA-seq biological replicate 1 |
| GSM7727915 |
MT-Gal4 driven BonusKD RNA-seq biological replicate 2 |
| GSM7727916 |
MT-Gal4 driven BonusKD RNA-seq biological replicate 3 |
| GSM7727917 |
MT-Gal4 driven whiteKD RNA-seq biological replicate 1 |
| GSM7727918 |
MT-Gal4 driven whiteKD RNA-seq biological replicate 2 |
| GSM7727919 |
MT-Gal4 driven whiteKD RNA-seq biological replicate 3 |
| GSM7727920 |
nos-Gal4 driven control RNA-seq biological replicate 1 |
| GSM7727921 |
nos-Gal4 driven control RNA-seq biological replicate 2 |
| GSM7727922 |
nos-Gal4 driven control RNA-seq biological replicate 3 |
| GSM7727923 |
nos-Gal4 driven BonusKD RNA-seq biological replicate 1 |
| GSM7727924 |
nos-Gal4 driven BonusKD RNA-seq biological replicate 2 |
| GSM7727925 |
nos-Gal4 driven BonusKD RNA-seq biological replicate 3 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE241372 |
SUMOylation of Bonus, the Drosophila homolog of Transcription Intermediary Factor 1, safeguards germline identity by recruiting repressive chromatin complexes to silence tissue-specific genes [ChIP-seq] |
| GSE241373 |
SUMOylation of Bonus, the Drosophila homolog of Transcription Intermediary Factor 1, safeguards germline identity by recruiting repressive chromatin complexes to silence tissue-specific genes [RNA-seq-MT-Gal4] |
| GSE241374 |
SUMOylation of Bonus, the Drosophila homolog of Transcription Intermediary Factor 1, safeguards germline identity by recruiting repressive chromatin complexes to silence tissue-specific genes [RNA-seq-nos-Gal4] |
|
| Relations |
| BioProject |
PRJNA1007768 |
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