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Series GSE241176 Query DataSets for GSE241176
Status Public on Aug 18, 2024
Title Fibroblast-specific TGF-b signaling mediates dysfunction, fibrosis and hypertrophy in a mouse model of obesity-associated type 2 diabetes [RNA-seq: Smad3 in dbdb]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Our study provides the first direct evidence supporting a fibroblast-mediated mechanism of dysfunction and adverse remodeling in the diabetic heart, highlighting the importance of interstitial cells in the pathogenesis of diabetic cardiomyopathy. Diabetes-associated activation of the TGF-b/Smad3 cascade may promote dysfunction not only by accentuating ECM deposition and crosslinking, but also by modulating cardiomyocyte phenotype and function. Thus, the TGF-b system may be a promising therapeutic target in patients with diabetes-associated heart failure.
 
Overall design Comparison of the transcriptomic profile of cardiac fibroblasts from Smad3KO vs. Smad3 lean and db/db animals. 3 samples per group (12 samples in total).
 
Contributor(s) Tuleta I, Sidoli S, Humeres C, Frangogiannis NG
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Submission date Aug 18, 2023
Last update date Aug 18, 2024
Contact name Izabela Tuleta
E-mail(s) izabela.tuleta@einsteinmed.edu
Phone 3475159231
Organization name Albert Einstein College of Medicine
Department Cardiology
Street address 1300 Morris Park Avenue
City NYC
State/province NY
ZIP/Postal code 10461
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (12)
GSM7718886 cardiac fibroblasts from Smad3 fl/fl db/db animals, 1
GSM7718887 cardiac fibroblasts from Smad3 fl/fl db/db animals, 2
GSM7718888 cardiac fibroblasts from Smad3 fl/fl db/db animals, 3
This SubSeries is part of SuperSeries:
GSE241180 Fibroblast-specific TGF-b signaling mediates dysfunction, fibrosis and hypertrophy in a mouse model of obesity-associated type 2 diabetes
Relations
BioProject PRJNA1006685

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE241176_Smad3KOdbdb__count.txt.gz 2.3 Mb (ftp)(http) TXT
GSE241176_Smad3KOdbdb__fpkm.txt.gz 3.9 Mb (ftp)(http) TXT
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Processed data are available on Series record

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