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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 01, 2024 |
| Title |
Functional analysis of membrane-associated scaffolding tight junction (TJ) proteins in tumorigenic characteristics of B16-F10 mouse melanoma cells. |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Tight junction (TJ) proteins (Tjps), Tjp1 and Tjp2, are tight junction-associated scaffold proteins that bind to the transmembrane proteins of tight junctions and the underlying cytoskeleton. In this study, we first analyzed the tumorigenic characteristics of B16-F10 melanoma cells, including cell proliferation, migration, invasion, metastatic potential, and the expression patterns of related proteins, after the CRISPR-Cas9-mediated knockout (KO) of Tjp genes. The proliferation of Tjp1 and Tjp2 KO cells significantly increased in vitro. Other tumorigenic characteristics, including migration and invasion, were significantly enhanced in Tjp1 and Tjp2 KO cells.
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| Overall design |
Mouse melanoma B16-F10 cells were transfected with CRISPR/Cas9+gRNA
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| Contributor(s) |
Ko E, Cha H, Kim D, Kim M, An H, Kim J, Jeong J, Song KS |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Aug 04, 2023 |
| Last update date |
Aug 01, 2024 |
| Contact name |
Eun-Ji Ko |
| Organization name |
Kosin University College of Medicine
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| Street address |
262, Gamcheon-ro, Seo-gu
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| City |
Busan |
| ZIP/Postal code |
49267 |
| Country |
South Korea |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA1002240 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE240070_RAW.tar |
500.0 Kb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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