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Series GSE239577 Query DataSets for GSE239577
Status Public on Dec 31, 2023
Title A targeted systemic delivery platform of therapeutic modified mRNA and modRNA-derived antibodies for precision triple negative breast cancer treatment.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary modified mRNA (modRNA) showed high efficacy and safety when used for COVID-19 mRNA vaccines. Upon vaccination, any cell receiving modRNA contributed to efficient expression of antigens resulting in robust immune response. However, in most disease settings it is crucial to restrict translation of therapeutic genes to clinically relevant cells. Here, we designed a breast cancer-Specific modRNA Translation system (bcSMRTs) for enriched gene expression in tumors after systemic delivery with lipid nanoparticles (LNP). Intravenous delivery of bcSMRTs led to a 114-fold increase in tumor-specific signal and a 383-fold decrease in other organs compared to regular modRNA. For therapeutic targeting, we designed modRNA-derived antibodies (modRNabs) in which host cells serve as a bioreactor to produce anti-checkpoint inhibitor antibodies such as anti-cytotoxic T lymphocyte antigen-4 (αCTLA-4). Our results show that αCTLA-4 modRNab inhibited tumor growth by 37% while bcSMRTs carrying Pip4K2c (Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma) gene did so by 25%. Importantly, combining the two reduced tumor size by 75% and reorganized the immune cell landscape in a poorly immunogenic 4T1 model of breast cancer. The modular platform we created to evaluate and screen gene-based treatments in a breast cancer model can easily be adjusted to other types of cancer.
 
Overall design The 4T1 breast cancer cell line (ATCC, #CRL-2539) was cultured in RPMI (Gibco, #72400-047) supplemented with 10% FBS and pen-strep. Cells were transfected with either Luc or Pip4K2c modRNA using Lipofectamine2000 (Invitrogen, #11668027) and collected 48h post transfection. RNA was isolated using Quick-RNA MiniPrep kit (Zymo Research, #R1055). n=2 in three independent experiments.
 
Contributor(s) Żak MM, Yoo J, Utrero-Rico A, Walter W, Kurian AA, Mainkar G, Adjmi M, Ojalvo DL, Haferlach T, Ochando J, Soon-Shiong P, Swirski FK, Zangi L
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Submission date Jul 28, 2023
Last update date Dec 31, 2023
Contact name Lior Zangi
Organization name Icahn School of Medicine at Mount Sinai
Department Cardiovascular Research Institute
Lab Zangi Lab
Street address 1470 Madison Ave
City New York
ZIP/Postal code 10029
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (12)
GSM7667505 4T1 48h_Luc rep 1_1 [MZ1]
GSM7667506 4T1 48h_Luc rep 1_2 [MZ2]
GSM7667507 4T1 48h_Luc rep 2_1 [MZ3]
Relations
BioProject PRJNA999725

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Supplementary file Size Download File type/resource
GSE239577_RawCounts.txt.gz 379.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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