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GEO accession:
Series GSE239447
Query DataSets for GSE239447
Status
Public on Dec 11, 2023
Title
Inseparable RNA binding and chromatin modification activities of a nucleosome-interacting surface in EZH2
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
38744974
Submission date
Jul 27, 2023
Last update date
Jun 28, 2024
Contact name
Qi Zhang
E-mail(s)
qi.z.zhang@monash.edu
Organization name
Monash University
Street address
23 Innovation Walk
City
Clayton
ZIP/Postal code
3800
Country
Australia
Platforms (2)
GPL20795
HiSeq X Ten (Homo sapiens)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (90)
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GSM5974936
Ctrl-Ctrl_IgG_cuttag_rp1
GSM5974937
Ctrl-Ctrl_H3K27me3_cuttag_rp1
GSM5974938
Ctrl-Ctrl_H3K27ac_cuttag_rp1
GSM5974939
KO-Ctrl_IgG_cuttag_rp1
GSM5974940
KO-Ctrl_H3K27me3_cuttag_rp1
GSM5974941
KO-Ctrl_H3K27ac_cuttag_rp1
GSM5974942
KO-WT_IgG_cuttag_rp1
GSM5974943
KO-WT_H3K27me3_cuttag_rp1
GSM5974944
KO-WT_H3K27ac_cuttag_rp1
GSM5974945
KO-mt2_IgG_cuttag_rp1
GSM5974946
KO-mt2_H3K27me3_cuttag_rp1
GSM5974947
KO-mt2_H3K27ac_cuttag_rp1
GSM5974948
KO-mt1_IgG_cuttag_rp1
GSM5974949
KO-mt1_H3K27me3_cuttag_rp1
GSM5974950
KO-mt1_H3K27ac_cuttag_rp1
GSM5974951
KO-dEZH2_IgG_cuttag_rp1
GSM5974952
KO-dEZH2_H3K27me3_cuttag_rp1
GSM5974953
KO-dEZH2_H3K27ac_cuttag_rp1
GSM5974954
Ctrl-Ctrl_IgG_cuttag_rp2
GSM5974955
Ctrl-Ctrl_H3K27me3_cuttag_rp2
GSM5974956
Ctrl-Ctrl_H3K27ac_cuttag_rp2
GSM5974957
KO-Ctrl_IgG_cuttag_rp2
GSM5974958
KO-Ctrl_H3K27me3_cuttag_rp2
GSM5974959
KO-Ctrl_H3K27ac_cuttag_rp2
GSM5974960
KO-WT_IgG_cuttag_rp2
GSM5974961
KO-WT_H3K27me3_cuttag_rp2
GSM5974962
KO-WT_H3K27ac_cuttag_rp2
GSM5974963
KO-mt2_IgG_cuttag_rp2
GSM5974964
KO-mt2_H3K27me3_cuttag_rp2
GSM5974965
KO-mt2_H3K27ac_cuttag_rp2
GSM5974966
KO-mt1_IgG_cuttag_rp2
GSM5974967
KO-mt1_H3K27me3_cuttag_rp2
GSM5974968
KO-mt1_H3K27ac_cuttag_rp2
GSM5974969
KO-dEZH2_IgG_cuttag_rp2
GSM5974970
KO-dEZH2_H3K27me3_cuttag_rp2
GSM5974971
KO-dEZH2_H3K27ac_cuttag_rp2
GSM5974972
Ctrl-Ctrl_IgG_cuttag_rp3
GSM5974973
Ctrl-Ctrl_H3K27me3_cuttag_rp3
GSM5974974
Ctrl-Ctrl_H3K27ac_cuttag_rp3
GSM5974975
KO-Ctrl_IgG_cuttag_rp3
GSM5974976
KO-Ctrl_H3K27me3_cuttag_rp3
GSM5974977
KO-Ctrl_H3K27ac_cuttag_rp3
GSM5974978
KO-WT_IgG_cuttag_rp3
GSM5974979
KO-WT_H3K27me3_cuttag_rp3
GSM5974980
KO-mt2_IgG_cuttag_rp3
GSM5974981
KO-mt2_H3K27me3_cuttag_rp3
GSM5974982
KO-mt2_H3K27ac_cuttag_rp3
GSM5974983
KO-mt1_IgG_cuttag_rp3
GSM5974984
KO-mt1_H3K27me3_cuttag_rp3
GSM5974985
KO-mt1_H3K27ac_cuttag_rp3
GSM5974986
KO-dEZH2_IgG_cuttag_rp3
GSM5974987
KO-dEZH2_H3K27me3_cuttag_rp3
GSM5974988
KO-dEZH2_H3K27ac_cuttag_rp3
GSM5974989
Ctrl-Ctrl_RNAseq_rp1
GSM5974990
KO-Ctrl_RNAseq_rp1
GSM5974991
KO-WT_RNAseq_rp1
GSM5974992
KO-mt2_RNAseq_rp1
GSM5974993
KO-mt1_RNAseq_rp1
GSM5974994
KO-dEZH2_RNAseq_rp1
GSM5974995
Ctrl-Ctrl_RNAseq_rp2
GSM5974996
KO-Ctrl_RNAseq_rp2
GSM5974997
KO-WT_RNAseq_rp2
GSM5974998
KO-mt2_RNAseq_rp2
GSM5974999
KO-mt1_RNAseq_rp2
GSM5975000
KO-dEZH2_RNAseq_rp2
GSM5975001
Ctrl-Ctrl_RNAseq_rp3
GSM5975002
KO-Ctrl_RNAseq_rp3
GSM5975003
KO-WT_RNAseq_rp3
GSM5975004
KO-mt2_RNAseq_rp3
GSM5975005
KO-mt1_RNAseq_rp3
GSM5975006
KO-dEZH2_RNAseq_rp3
GSM5975007
Ctrl-Ctrl_RNAseq_rp4
GSM5975008
KO-Ctrl_RNAseq_rp4
GSM5975009
KO-WT_RNAseq_rp4
GSM5975010
KO-mt2_RNAseq_rp4
GSM5975011
KO-mt1_RNAseq_rp4
GSM5975012
KO-dEZH2_RNAseq_rp4
GSM7665216
1-K562-IN
GSM7665217
2-WT-SUZ12
GSM7665218
3-mt1-SUZ12
GSM7665219
4-mt2-SUZ12
GSM7665220
5-dEZH2-SUZ12
GSM7665221
6-WT-EZH2
GSM7665222
7-mt1-EZH2
GSM7665223
8-mt2-EZH2
GSM7665224
9-dEZH2-EZH2
GSM7665225
10-WT-K27me3
GSM7665226
11-mt1-K27me3
GSM7665227
12-mt2-K27me3
GSM7665228
13-dEZH2-K27me3
This SuperSeries is composed of the following SubSeries:
GSE199543
Inseparable RNA binding and chromatin modification activities of a nucleosome-interacting surface in EZH2
GSE239445
Inseparable RNA binding and chromatin modification activities of a nucleosome-interacting surface in EZH2 [ChIP-seq]
Relations
BioProject
PRJNA999315
Download family
Format
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TXT
Supplementary file
Size
Download
File type/resource
GSE239447_RAW.tar
6.8 Gb
(http)
(custom)
TAR (of BED, BW)
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