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| Status |
Public on Nov 24, 2023 |
| Title |
Partial in vivo reprogramming enables injury-free intestinal regeneration via autonomous Ptgs1 induction. |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Web link |
https://www.science.org/doi/10.1126/sciadv.adi8454
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| Citation(s) |
38000027 |
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| Submission date |
Jul 24, 2023 |
| Last update date |
Dec 08, 2023 |
| Contact name |
Somi Kim |
| E-mail(s) |
ksomi47@postech.ac.kr
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| Phone |
+821042465626
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| Organization name |
POSTECH
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| Department |
Life Sciences
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| Lab |
Laboratory of Computational Biology
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| Street address |
47, Jigok-ro
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| City |
Pohang |
| ZIP/Postal code |
37666 |
| Country |
South Korea |
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| Platforms (3) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
| GPL28457 |
DNBSEQ-G400 (Mus musculus) |
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| Samples (20)
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| GSM7596435 |
Organoids, 0.1𝜇g/ml Dox, rep2 |
| GSM7596436 |
Organoids, 0.5𝜇g/ml Dox, rep1 |
| GSM7596437 |
Organoids, 0.5𝜇g/ml Dox, rep2 |
| GSM7596438 |
-Dox, replicate 1, scRNAseq |
| GSM7596439 |
+Dox, replicate 1, scRNAseq |
| GSM7658081 |
Organoids, Cont, day4, rep1 |
| GSM7658082 |
Organoids, Cont, day4, rep2 |
| GSM7658083 |
Organoids, Cont, day7, rep1 |
| GSM7658084 |
Organoids, Cont, day7, rep2 |
| GSM7658085 |
Organoids, IR, day4, rep1 |
| GSM7658086 |
Organoids, IR, day4, rep2 |
| GSM7658087 |
Organoids, IR, day7, rep1 |
| GSM7658088 |
Organoids, IR, day7, rep2 |
| GSM7658089 |
Adult intestinal organoids, rep 1 |
| GSM7658090 |
Adult intestinal organoids, rep 2 |
| GSM7658091 |
Fetal intestinal organoids, rep 1 |
| GSM7658092 |
Fetal intestinal organoids, rep 2 |
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| This SuperSeries is composed of the following SubSeries:
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| GSE237172 |
OSKM-induced mouse intestinal organoids [RNAseq_Dox] |
| GSE237173 |
OSKM-induced epithelial cells of mouse intestine [scRNA-seq] |
| GSE238055 |
Partial in vivo reprogramming enables injury-free intestinal regeneration via autonomous Ptgs1 induction [RNAseq_IR] |
| GSE238056 |
Partial in vivo reprogramming enables injury-free intestinal regeneration via autonomous Ptgs1 induction [RNAseq_Fetal] |
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| Relations |
| BioProject |
PRJNA997871 |
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