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Series GSE238031 Query DataSets for GSE238031
Status Public on Jul 24, 2023
Title intact Hi-C from psoas muscle (ENCSR538PNC)
Project ENCODE
Organism Homo sapiens
Experiment type Other
Summary W80 psoas muscle intact dnase hic

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR538PNC/
 
Citation(s) 22955616
BioProject PRJNA30709
Submission date Jul 22, 2023
Last update date Jul 26, 2023
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (2)
GSM7657973 intact Hi-C from psoas muscle (ENCLB149TLS)
GSM7657974 intact Hi-C from psoas muscle (ENCLB139SBH)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE238031_ENCFF136XCV_mapping_quality_thresholded_contact_matrix_GRCh38.hic.gz 46.6 Gb (ftp)(http) HIC
GSE238031_ENCFF357LTX_contact_domains_GRCh38.bedpe.gz 218.9 Kb (ftp)(http) BEDPE
GSE238031_ENCFF363RCK_contact_matrix_GRCh38.hic.gz 50.9 Gb (ftp)(http) HIC
GSE238031_ENCFF374DJI_pairs_GRCh38.pairs.gz 14.9 Gb (ftp)(http) PAIRS
GSE238031_ENCFF383OJA_nuclease_cleavage_frequency_GRCh38.bigWig 8.0 Gb (ftp)(http) BIGWIG
GSE238031_ENCFF887GHW_loops_GRCh38.bedpe.gz 906.0 Kb (ftp)(http) BEDPE
GSE238031_RAW.tar 10.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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