NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE23725 Query DataSets for GSE23725
Status Public on Aug 21, 2010
Title Expression data from mouse neonatal ovarian xenobiotic culture experiments
Organism Mus musculus
Experiment type Expression profiling by array
Summary Mammalian females are born with a finite number of non-renewing primordial follicles, the majority of which remain in a quiescent state for many years. Due to their non-renewing nature, these “resting” oocytes are particularly vulnerable to xenobiotic insult, resulting in premature ovarian senescence and the formation of dysfunctional oocytes. In this study we characterised the mechanisms of ovotoxicity for three ovotoxic agents, 4-Vinylcyclohexene Diepoxide (VCD), Methoxychlor (MXC), and Menadione (MEN), all of which target immature follicles. Neonatal mouse ovaries (PND3-4) were cultured in the presence of 4-Vinylcyclohexene Diepoxide (50uM), Methoxychlor (50uM), and Menadione (5uM) for 96 hours to observe their effects on the ovarian transcriptome. This was done in the hopes of gaining a better understanding of the mechanisms underpinning xenobiotic induced pre-antral ovotoxicity.
 
Overall design Ovaries from day 3-4 Swiss neonatal mice were cultured in xenobiotic containing media for 96 hours. The ovaries were then collected for RNA extraction and hybridization on Affymetrix microarrays (Mouse 430 version 2.0 GeneChip).
 
Contributor(s) Pye VJ, Sobinoff AP, McLaughlin EA
Citation(s) 20829426
Submission date Aug 20, 2010
Last update date Feb 11, 2019
Contact name Alexander Peter Sobinoff
E-mail(s) c3045119@uon.edu.au
Organization name University of Newcastle Australia
Department Science and IT
Lab Reproductive Science Group
Street address University Drive
City Newcastle
State/province NSW
ZIP/Postal code 2308
Country Australia
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (12)
GSM585549 Control (0.1% DMSO) rep 1
GSM585550 Control (0.1% DMSO) rep 2
GSM585551 Control (0.1% DMSO) rep 3
Relations
BioProject PRJNA130681

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23725_Control_4-Vinylcyclohexene_Diepoxide.xls.gz 15.0 Mb (ftp)(http) XLS
GSE23725_Control_Menadione.xls.gz 14.8 Mb (ftp)(http) XLS
GSE23725_Control_Methoxychlor.xls.gz 14.8 Mb (ftp)(http) XLS
GSE23725_RAW.tar 48.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap